3D Structure for uvig_350325_CDS_0027 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.69 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_350325_CDS_0027 1 AcrIE6 0.70 View Alignment uvig_350325_CDS_0027 M F G K K K K S F N P Y E M R V E E M T -Y -E -L W E K -I D Y -M D K K T -R Q V I -T -R -V -G V I N -L Y P -(60)
M E +
AcrIE6 M --N ------N D ---T E V L -E -Q -Q -I K A F E -L L A ----D -E L K D -R -L -P ----T -L E I
uvig_350325_CDS_0027 D -G A D R K K A V S D A E K A K Q S L L V A I G A Y D T A R M -E Y N -D -Y -I K K Y T D K F D S P K K E W S T T S (120)
+ + ++ + I +
AcrIE6 -L -------S P M Y T A V M V T Y D L I G K Q ---L A -S R R -A -E -L I E I L E E Q Y P G H A A --D -L -
uvig_350325_CDS_0027 H E V I E R A Y E R Y N K -E (135)
AcrIE6 ------S I K N -L -C P
uvig_350325_CDS_0027 2 AcrIE1 0.69 View Alignment uvig_350325_CDS_0027 M F G K K K K S F N P Y E M R V E E M T Y E L W E K I D Y M D K K T R Q V I T R V G V I N L -Y P D G A D R K -K -A -(60)
M K + + + L R
AcrIE1 M -E --K -K -------L S D A Q V A L V A A W R K -----------------Y ---P D L R -E -S -L
uvig_350325_CDS_0027 V S D A E K A K Q S L L V A I G A Y D T A R M E Y N D Y I K K -Y T D K F D -------S ----P ----K -K -E (120)
+A + + ++ + E YI++ + +
AcrIE1 -E E A A S I L S L I V F Q A E T L S D Q A N E L A N Y I R R Q G L E E A E G A C R N I D -I M R A K W V E V -C -G -
uvig_350325_CDS_0027 -W -S -T -T -S H E V I E R A Y E R Y N K -E (145)
V A +R +
AcrIE1 E -V -N -Q -H G I R V Y G D A I D R D --V D
uvig_350325_CDS_0027 3 AcrIIC4 0.61 View Alignment uvig_350325_CDS_0027 M F G K K K K S F -N P Y E M R V E E M T Y E L W E K I D Y M D K K T R Q -V I T R V G V I N L Y P D G A -D R K -K A (60)
M N + +
AcrIIC4 M -K --I T -S S N ------------F A T I A T ------S E N ----------F A ---K -L S V -L
uvig_350325_CDS_0027 V -S -D -A -E K -A K Q S L L V A I G A Y D T A R M -E -Y N -D Y I K --K Y T D K F -D -S ----P -K K E W (120)
E +K A+ K Y+ E
AcrIIC4 P K -N -H -R E -P I K G L F K S A V E Q ----F S S -A -R D -F F K N E N Y S K E L A -E K F N K E -A V N E A
uvig_350325_CDS_0027 S T -T -S -H E -V I E -R -A Y E R Y N K E (144)
+I A
AcrIIC4 V -E -K -L Q -K A I -D -L A E K Q G I Q F
uvig_350325_CDS_0027 4 AcrIF23 0.60 View Alignment uvig_350325_CDS_0027 M F G K K K K --------S --------------F -N -P Y E M R -----V E E -------------(60)
M P
AcrIF23 M T -N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A -Y -D P S Y N Y A A N T R R A -S L S P R G I D A R A V A
uvig_350325_CDS_0027 -M -T ---------Y -E -L W -E K I -D Y -M D K K T R Q V I T R V G V I N L Y P D G A D R K -K A -V S D - (120)
+ K Q + S
AcrIF23 K T F -G G R A L T G T A -R -Q -K E -W A E K -I R A E K V Q Q M N Q D Q A E M A ---------C D -P -S G L
uvig_350325_CDS_0027 A E K A K Q S L L V A I G A Y D T A R M E Y N D Y I K K Y T D K F D S P K -K E -W -S T -T S H E V I E -R -A -Y E (180)
A + + K S K ++
AcrIF23 -L T A A K F W I E N R N D S A Q E I A G F V M Q Q K A L L A Q H R S A K A -A G -Q A -D K V A K I A -A -E -Y -N
uvig_350325_CDS_0027 -R Y N -K --E (189)
+ +
AcrIF23 A -L T A R W G F
uvig_350325_CDS_0027 5 AcrIC3 0.54 View Alignment uvig_350325_CDS_0027 M F G K K K K S F N P Y E M R V E E M T Y E L -W E K I D Y M D K K T R Q V I T R V G V I N L ---Y -P D G A D R K K (60)
M + V +V+ G + G++ +
AcrIC3 M -S --I Q V T S T N G R T V ----N L -E ----I E ---L -G S V V A S S G Q V K F M A D K T D R G L E S R F
uvig_350325_CDS_0027 A V S D A E K A K Q -S L L -V A I -G -A Y D T A R M E Y N D Y I K K Y T D K F D S P K K E W S T T S H E V I E R A Y (120)
+V + + ++ N + +
AcrIC3 L V P E -A -G N -R R I E V A L T G -R ----D L E A A N A L F S E L A A S V E A T N E -M Y R E L D A E R A Q I N
uvig_350325_CDS_0027 E R Y N K E (126)
AcrIC3 K A L -E G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;