3D Structure for uvig_349871_CDS_0015 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 88.13 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_349871_CDS_0015 1 AcrIIA7 0.68 View Alignment uvig_349871_CDS_0015 M R I K K I E E M K K E T F D F S E A L R R M K E G K K V K R Y G W G S S D S Y S I ----------------G K (60)
M K G+ V R GW
AcrIIA7 M T F G ---Q A L ----------E S L K R G H L V A R K G W N G K G M F I F M R P E D S L P T N M I V N Q V K S
uvig_349871_CDS_0015 ----------N ----S --W ----G -R E Y V Y I T G K P H V S V --V D -I S C S N I L A N D W E E V E R (120)
Y+ V +S + LANDW V
AcrIIA7 L P E S F K R W V A -N N H G D S E T D R I K -F T A Y L C M K A A D G T I V N G W -L A S Q T D M L A N D W V I V -E
uvig_349871_CDS_0015 2 AcrVIA3 0.55 View Alignment uvig_349871_CDS_0015 M R I K K I E E M K K E T F D F S E A L R R M K E G -K K -V K R Y G W G -S S D S Y S -I -G K N S W G R E -Y V -Y (60)
M K G K
AcrVIA3 M F -K E ---F L E K C L R ---------Y -G -N L Y I L E E T G D R K K -V K R -I S K R H G K V T E A S V -
uvig_349871_CDS_0015 I T G -K P --H V -S V V D ---I -S C S -N I L A -N D W E E -V E -R (99)
+ ++ + S I+ + +
AcrVIA3 L L F D S G T K -R T T I N E I Y L -N S Q G Y F I I R D Q K R L K L E K F K
uvig_349871_CDS_0015 3 AcrIIA4 0.54 View Alignment uvig_349871_CDS_0015 M R I K K -I E E ---M -K K -------E -T -F D F S E A L R R M K -E -G K K V K R Y G W G S S D S -Y S I G (60)
M I I E + ++ R G + SI
AcrIIA4 M N I N D L I R E I K N -K D Y T V K L S G T -D -S N S I T Q L I I R V N N -D G N E Y V I S E S E N ---E -S I V
uvig_349871_CDS_0015 K -N S W G R E Y V Y I T G -K P H V -S -V -V -D -I S C S N I L A -N D --W E E ---V E R (110)
AcrIIA4 E K F I S A ----F ---K -N -G W -N -Q -E -Y E D E E E F Y -N D M Q T I T -L K S E L N
uvig_349871_CDS_0015 4 AcrIIA12 0.53 View Alignment uvig_349871_CDS_0015 M R -I K K I E E M K -K E T F D F -S E A L R R M -K E G K K V K R Y G --W G -S -S D S Y S I ---G K N S W G R (60)
M K E+++ + +
AcrIIA12 M S K T M ----Y K N ---D -V I -E L I K N A K T N N E E L L F T S V E R N T R E A -A T Q Y F R C P E K H V S D
uvig_349871_CDS_0015 E Y V Y I T G K P H V S V V D I S C S N -I L A N D W E -E -------V E R (100)
VY + D +
AcrIIA12 A G V Y Y G E D -----F E F D G F E I -F E D D L I Y T R S Y D K E E L -N
uvig_349871_CDS_0015 5 AcrIF18 0.51 View Alignment uvig_349871_CDS_0015 M R I K K I E E M K K E T F D F S E A L R R M K E G K K V K R Y G W G S S D S Y S -I G K N S W G R E Y V Y I T G K P H (60)
M K +G + + G + G
AcrIF18 M T --T -I --K A A Y I S --K -D Q N W N D G ---------T -T T -Y W -F D V -N G E T F G V V H G G E S
uvig_349871_CDS_0015 V S V V D I -S ----C -S N I L A N D ---W E -E -V E R (92)
++ + + + E +
AcrIF18 W N A K V V D C D G A P -S D Q Y T V D Q F N I T E D -M I A E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;