3D Structure for uvig_347026_CDS_0109 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 91.74 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_347026_CDS_0109 1 AcrIIA7 0.75 View Alignment uvig_347026_CDS_0109 M T G N N E Y L A N G H F G F G N V I Q F L K E G K A C R R S G W N G K G L F I V K Q V P S H I E G -D I -I P N M Q S (60)
M +++ LK G++ R GWNGKG FI + + + S
AcrIIA7 M -T F G -----------Q A L E S L K R G H L V A R K G W N G K G M F I F M R P E D S L P T N -M I V N Q V K S
uvig_347026_CDS_0109 L P Q S A K N I L M S ----R E N P H -I D Y T N Q M L I I N P D G R -A D S W V P S S S D V F A E D W E V V T D (118)
LP S K + + E+ I T DG + W+ S++D A DW +V +
AcrIIA7 L P E S F K R W V A N N H G D S E T D -R I K F T A Y L C M K A A D G T I V N G W L A S Q T D M L A N D W V I V -E
uvig_347026_CDS_0109 2 AcrIIA4 0.54 View Alignment uvig_347026_CDS_0109 M T G N N E Y L A N G H F G F G -N V -I -Q F L K E -G -K A C R R S G W N --G -K G L F I V K Q V P S H I E G D I (60)
M N + +K + SG L ++ +
AcrIIA4 M -N I N -----------D -L I -R -E I K N K -D Y T V K L S G T D S N S I T Q L I -I R V N N D G -N E Y V
uvig_347026_CDS_0109 ---I P N M Q S L P Q S A K N I L M S R E N P H I D Y -T N Q M L I I -N P D G R A D S -W -V P S S S D V F A E D - (120)
+ + + N + + + ++ +
AcrIIA4 I S E ---S -E N E S I V E K F I S A F K N ----G W --N -Q E Y E -D E E E F Y N D -M ---Q T -I --T -L
uvig_347026_CDS_0109 W E V V T D (126)
AcrIIA4 K S -E L N
uvig_347026_CDS_0109 3 AcrIIA12 0.49 View Alignment uvig_347026_CDS_0109 M T G N N E Y L A N G -H -F G F G N V I Q F L K -E G K A C R R -S G W -N -G ---K G L F I V K Q -V P S H I E G (60)
M+ + +I +K S N +
AcrIIA12 M S -K T M ----Y K -N -D V I E L I K N A K T N N E E L L F T S V E R N T R E A A T Q Y --F R -C P E K ----
uvig_347026_CDS_0109 D I -I P N M Q S L P Q S A K N I L M S R E N P H I -D -Y T N Q M L I I N P D G R A D S W V P S S S D V F A E D W E V (120)
+ I D + + D E
AcrIIA12 H -V -S D A G V -------Y Y G -E D ----F -E -F D G F E I -F E D D L I Y T R S -----Y ---D K E E
uvig_347026_CDS_0109 V T D (123)
AcrIIA12 -L N
uvig_347026_CDS_0109 4 AcrIF18 0.49 View Alignment uvig_347026_CDS_0109 M T G N N E Y -L A N G H F G F G N V I Q F L K E G K A C R R S G -W N G K G L F I V K Q V P S H I E G D I I P N M Q S (60)
MT + ++ +G NG +V+
AcrIF18 M T T I K A A Y I S K -D ------Q N W -N D G T T T Y W F D V -N G E T F G V V H G -G E S -----------
uvig_347026_CDS_0109 L P Q S A K N I L M S R E N P H I D Y T N -Q M L I I N P D G R A D S -W V P -S S S D V F A E D W E V V T D (115)
++ DG + + + + +
AcrIF18 --------------------W N -A K V V D C D G A P S D Q -Y T V D Q F -N -I -T E D M I A E
uvig_347026_CDS_0109 5 AcrIIA24 0.46 View Alignment uvig_347026_CDS_0109 M T G N N E Y L ---A N G H F G F G N -V I Q F L K E G K A C R R S G W N G K G L F I V K Q V P S H I E G D I I P N M (60)
M + L + E + + + + + G
AcrIIA24 M K K A Q Q L L K E I K T N N V -S Y A I ----M D E D N E I Y C N K E T N N -I M D I Y G Y D N -E N G H F Y G V -
uvig_347026_CDS_0109 Q S L P Q -S A K N I L M S -R E N P H I ---D -Y -T -N Q M L I I N P D G R A D S W V P S S S D V F A E D W E V V (120)
+ + R L + + + +PS F +
AcrIIA24 ---Y G D V V D G Q I D -S R Y F S D D A I L -N -A -I D K L L F L G D P I K R -T D L P S D A -D F K R T F F -F
uvig_347026_CDS_0109 T D (122)
+
AcrIIA24 E E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;