3D Structure for uvig_343214_CDS_0030 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 84.66 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_343214_CDS_0030 1 AcrIE1 0.75 View Alignment uvig_343214_CDS_0030 M T M R E L Q N -D K ---N -Y S A L D I T V K S I Y M T T K N L T D V K N K A E K A Y E L I N D L I S H H S L D M M (60)
M + L+ S+ L+ + AE + + +N+L++
AcrIE1 M -E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A A S I L S L I V F Q A E T L S D Q A N E L A N Y I R R ---
uvig_343214_CDS_0030 D L A Y P G H D -G K -Q D A D V V A E M M S L R Q T V N S L S A A C G M L V Y K L -T E V I R D (109)
G + + + ++ + + D
AcrIE1 Q ----G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D -V D
uvig_343214_CDS_0030 2 AcrIE6 0.63 View Alignment uvig_343214_CDS_0030 M T M R E L Q N D K -N Y S A L D I T V K S I Y -M -T T K N L T D V K N K A E K A Y E L I N D L I S H H -S L D M M D (60)
M+ ++ + L+ +L +
AcrIE6 M N --N -----D ----T E V L E ----Q -Q -----------I K A F E L L A D E L K D R L P -T L E I -
uvig_343214_CDS_0030 L -A Y P G H D G K Q D A D V V A E M M S L R Q T V N S L S A A C G M L V Y -K -L --------T E V I R D (116)
V + + ++ S A ++ +
AcrIE6 -L ------S P M Y T A V M V T Y D L I G K Q L A S R R A E L I E I L E E -Q Y P G H A A D L S I K N L C P
uvig_343214_CDS_0030 3 AcrIC3 0.60 View Alignment uvig_343214_CDS_0030 M T M R E L Q N D K N Y S --A L D I T V K S I Y M T T K N L T D V K N ---K -A -E K A Y E L I N D L I S -H -H -(60)
M+ + N L+I + S+ ++ ++ + L +
AcrIC3 M S I Q V T -S T -N G R T V N L E I E L G S V V A S S G Q V K F M A D K T D R G -L -E S R F L ---V --P -E -A
uvig_343214_CDS_0030 S --L -D M -M -D L A Y P G H D G K Q D A D V V A E M M S L R Q T V N S L S A A C G M L V Y K L T E V I R D (116)
++ +D + E N ++ ++
AcrIC3 G N R R I --E -V -A L T G -R D L E A A N A L F S E L A A S V E A T N E M Y R E L D A E R A Q I N K A L E G
uvig_343214_CDS_0030 4 AcrIIC4 0.55 View Alignment uvig_343214_CDS_0030 M T -M R -E L Q N ---D K N -Y S A L D I T V K S I Y M T T K N L T D V -K N -K A E K A Y E -L I N D L I S H H S (60)
M + L + K + + A + D +
AcrIIC4 M K I T S S N F A T I A T S E -N F A K L S V L P K ---N H R E P I K G L F -K S -A V E Q F S S -A R D F F K N E N
uvig_343214_CDS_0030 L D M M D L A Y P G H D G K -Q D -A D V V A E M M S L R Q T V N S L S A A C G M L V Y K L T E V I R -D (113)
+ + VN + ++ +
AcrIIC4 Y ----------S K E L A E K ----F ----N K E A V N E A V E K L Q K A I D L A E K Q G I Q F
uvig_343214_CDS_0030 5 AcrIF23 0.54 View Alignment uvig_343214_CDS_0030 M -T M R E L Q -N D K N -----Y S ----A -L D I -T V K S I Y -M ----------------------(60)
M + + +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G -Q W I D L E T G -I A Y D P S -Y -N Y A A N T R R A S L S P R G I D A R A V A
uvig_343214_CDS_0030 -------------T T K N L T D V K N K A E K -A Y E -L I N D L I S H H S L D M M D L A Y P G -H D -G -K Q (120)
+ + ++ + + +A +
AcrIF23 K T F G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N -Q D Q A E M A -C D P S G L L T A A K F W I E N R -N D S
uvig_343214_CDS_0030 D ---A D V V A E M M S L R Q T V N S L S A -----A C G M L V Y K L T E V I ---R -D (167)
A V L + S+ A ++ + +
AcrIF23 A Q E I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K V A K I A A E Y N A L T A R W -G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;