3D Structure for uvig_342319_CDS_0004 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 90.23 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_342319_CDS_0004 1 AcrIE1 0.73 View Alignment uvig_342319_CDS_0004 M K K ---S -I -M T D ----K ----------E -R -I -T -E -L E L ------Q L ----R E K D ---(60)
M K E L L +L E
AcrIE1 M E K K L S D A -Q V A -L V A A W R K Y P D L R E S L E E -A -A -S -I L S L I V F Q A E T L S D Q A N E L A N Y I
uvig_342319_CDS_0004 -G I I K -A L -Q -D -A F -D -K Q -L -D I I E K L -R D R I D E ---M ----T ----P -D -D I A (116)
A + K + E D+
AcrIE1 R R Q G L E E -A -E -G A -C -R -N I -D I M R A K -W V E V C G E V N Q H G I R V Y G D A I -D -R D V D
uvig_342319_CDS_0004 2 AcrIC3 0.63 View Alignment uvig_342319_CDS_0004 M K K S -I M T D -K ---------E R I -T E L E L -----------------------------Q L (60)
M + T +
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V -V A S S G Q V K F M A D K T D R G L E S R F L V P E A G N R R I E V A L T
uvig_342319_CDS_0004 R -E K D -G I I -K A L -Q D A F -D -K Q L D I I E ----K L -R D -R I D E M T P D -D I A (110)
++ AL ++++ +
AcrIC3 G R -D L E -A A N -A L F -S E L A -A -S V E A T N E M Y R E -L D -A E R A Q I N -K A L E G
uvig_342319_CDS_0004 3 AcrIE6 0.62 View Alignment uvig_342319_CDS_0004 M K K S I M T D K E R I T E L E L -------Q L ----------R E K D G I I K A L Q D A F D K Q L D I I E -K (60)
M I EL L ++ +
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I E -
uvig_342319_CDS_0004 -L -R -D R I -D E M -T ----P -D D -I A (85)
+
AcrIE6 I -L -E E Q -Y P G -H A A D L S -I K N L C P
uvig_342319_CDS_0004 4 AcrIF23 0.57 View Alignment uvig_342319_CDS_0004 M K K -S -I -M T D -------K -E R I T -E -L E L ------------------------------(60)
M + + I
AcrIF23 M T N F Q T W L D S A D I P V Q Q N -G Q W I -D L E T G -I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K
uvig_342319_CDS_0004 -----------------------------------------Q L ----R E K D G I I K A L Q D A (120)
+
AcrIF23 T F G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D P S G L -L T A A K F W I E N R N D S A Q E
uvig_342319_CDS_0004 F D K Q L D I I E K L R D ----R I ---------D E ---M T P D D ----I A (164)
+ L
AcrIF23 I A G F V M Q Q K A L L A Q H R S A -K A A G Q A D K V A K I A A E Y N A L T A R W G F
uvig_342319_CDS_0004 5 AcrIIA11 0.55 View Alignment uvig_342319_CDS_0004 M K K -S I M T D -------K ---------------E ----------R I T E L ----E L ------(60)
M ++ + + R+ +
AcrIIA11 M A D M T L R Q F C E R Y R K G D F L A K D R E T Q I E A G W Y D W F C D D K A L A G R L A K I W G I L K -G I T S D Y
uvig_342319_CDS_0004 ------------------------------------------------------------ (120)
AcrIIA11 I L D N Y R V W F K N N C P M V G P L Y D D V R F E P L D E E Q R D E L Y F G V A I D D K R R E K K Y V I F T A R N D Y
uvig_342319_CDS_0004 -----------------Q L R -E -----K D G I I K A L Q D A F D K Q L D I I E K L R D R I D E M T P D D (180)
E + + + R+DE
AcrIIA11 E N E C G F N N V R E V R Q F I N G W E D E L K N E E F Y K A R E K K R Q E M E E A N N K F A E I M Q R A D E I L W N L
uvig_342319_CDS_0004 I -A (183)
AcrIIA11 K E D
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;