3D Structure for uvig_334196_CDS_0140 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 86.31 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_334196_CDS_0140 1 AcrIE1 0.71 View Alignment uvig_334196_CDS_0140 M R I E ---D L K -S W ---T I D -Q -L -K -E -E -V V R L -S E -E C E K K Q H -I I L D Y K A L S E T L N Q (60)
M D+ I+ ETL+
AcrIE1 M E -K K L S D A -Q V A L V A A W -R -K -Y -P -D -L R E S -L E -E -A A S I L S L I V F ----Q A E T L S D
uvig_334196_CDS_0140 K L L E N D N W K -L P T D E V E N V N T -G H P S I E W Y E Q R H Q D D C I T I N Q L Y T T I D V -I V -D -R Y A N (120)
+ E N +E + + + Y
AcrIE1 Q A N E L A N Y I R --R Q -------G -L E E A E G A C R N I D I M R A K W V E V C G E V N Q H -G I -R V Y G D
uvig_334196_CDS_0140 L R K N K G M C (128)
+
AcrIE1 A I D R D V -D
uvig_334196_CDS_0140 2 AcrIC3 0.64 View Alignment uvig_334196_CDS_0140 M R I E D L K -S W T I D Q L K E ---E V V R L S E E C E K K Q H I I L D Y K A L S -E -T L N Q K L L E -N -D N -(60)
M I + + + L K ++
AcrIC3 M S I -Q V T S T --N ---G R T V N L E I E L G S V V A S S ----G Q V ----K -F -M A D K T D R G -L E S R
uvig_334196_CDS_0140 W K L P T D E V E N ---V N T G H P S I E W Y E Q R H Q D D C I T I N Q L Y T T I D V I V D R Y A N L R K N K G M C (119)
+ +P V +E ++ +++ + A++ K
AcrIC3 F L V P E A -G N R R I E V A L T G R D L E A A N A L F S E L A A S V E A T N E M Y R E L D A E R A Q I N K A L E -G
uvig_334196_CDS_0140 3 AcrIE6 0.60 View Alignment uvig_334196_CDS_0140 M R I E D L K S W T I D Q L K E E V V -R L S E E C E K K Q H I I L D Y K A -L S -E -T -L -N -Q -K -L -L -E N (60)
M + L I
AcrIE6 M N --N D ----T E V L E ----Q ----Q -------I K ----A F -E -L -L -A -D -E -L -K -D R -
uvig_334196_CDS_0140 -D -N W K L P T D E V E N V N T G H P -S I E W Y E Q R H Q D D C I T I N Q L Y T T I D V I V D -R -Y -A -N L R K (120)
E+ + Y+ L ++ L
AcrIE6 L -P -T L ----E I L --S P M Y T A V M V T Y D L I G K Q L A S R R A E L I E I L E E Q Y P G -H -A -A D L -S
uvig_334196_CDS_0140 -N K G M -C (127)
AcrIE6 I K N -L C P
uvig_334196_CDS_0140 4 AcrIF23 0.58 View Alignment uvig_334196_CDS_0140 M -R I E -D L K ----S ------W T I D Q L K E ----------E V V ------------------R (60)
M L W
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N --T R R A S L S P R G I D A R A V A K T
uvig_334196_CDS_0140 L S ---E E C E K K Q H I I L D Y K A L S E T L N Q K L L E N D N W -K -L P T D ----E V E N V N -T G H P S I E (120)
+ + Q + + S+
AcrIF23 F G G R A --L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M -A C D P S G L L T A A K F W I E N R N D S A Q
uvig_334196_CDS_0140 W Y E Q R H Q D D -C -I -T I -N -Q L -Y -T -----T I D V I V D R -Y -A -N L R K -N -K ---G -M C (178)
Q V +
AcrIF23 E I A G F V M Q -Q -K -A L -L -A Q -H -R -S A K A A G Q A D K V A K I -A -A -E Y N A -L T A R W -G -F
uvig_334196_CDS_0140 5 AcrIF2-IC2 0.57 View Alignment uvig_334196_CDS_0140 M R I E D L K S W T I D Q L K E E V V R L S E E C E K -K -Q H I I L D Y K A --L S E -T L N Q K L L E N D N W K L -(60)
M + + + + + + + +
AcrIF2-IC2 M A T -K T A Q M I A Q ----Q ---H K D T -V A A -C E A -------A E A I -A I A K D Q V W D G E G Y T K Y
uvig_334196_CDS_0140 -P T D -E V E N V N T G H P S I -E W -Y E -Q R H Q D D C I T I N Q L Y T T I D V -I V D R Y A N L R K -N K G M C (120)
D + + + + L + + L
AcrIF2-IC2 T F -D D N -S V L I Q S G T T Q Y A -M D -A D D A D S I K G Y A D W L D D E A R S A E A S E I E R L L E S V E -E E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;