3D Structure for uvig_332992_CDS_0002 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 94.59 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_332992_CDS_0002 1 AcrIE1 0.88 View Alignment uvig_332992_CDS_0002 M T ---Q K T R D ----------R -L ----C D ----L -D -E -I -H -M -K L H C -S I E -A V R Q S -(60)
M + + + +
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L -R E S L E E A A S I -L -S -L -I -V -F -Q A E T -L S D -Q A N E L
uvig_332992_CDS_0002 W V A -M T Q G E S A P C ----K D D Y D A L Y -G I Y A Y -L S -E -L -E -E -Q -L -E I C K E D L W K -A -C (120)
+ D+ + D+
AcrIE1 -A N Y I R R Q G L E E A E G A C -R N I D I M R A -K W V E V -C G -E -V -N -Q -H -G I R V Y G D A I D R -D -
uvig_332992_CDS_0002 -I (122)
AcrIE1 V D
uvig_332992_CDS_0002 2 AcrIE6 0.85 View Alignment uvig_332992_CDS_0002 M T Q K T -R D R L C D L D E I H M K L H C S I E A V R Q S W V A M T Q G ---E S A P C K D D Y D A L Y G I -Y A Y L (60)
M++ L ++ ++ YD++
AcrIE6 M N N -D T E V -L E ---Q Q I K A F E L L A D E L K D R L P T L E -I L S P M Y T A V M V T Y D L I G K Q L A -S R
uvig_332992_CDS_0002 -S E -L -E E Q L E I C -K -E D L -W -K ----A -C -I (92)
E LE
AcrIE6 R A -E -L I E I L E E -Q -Y P G -H A A D L S I K -N L C P
uvig_332992_CDS_0002 3 AcrIF2 0.78 View Alignment uvig_332992_CDS_0002 M -T Q K T R D R L C D ---L D E I H M K L H C S I E ------A V R --Q -S W V -A M T -Q -G -E S A ---P (60)
M Q +D + E+ ++ ++ + +
AcrIF2 M I A Q Q H K D T V A A C E A -A E A I A I A K D Q V W D G E G Y T K Y -T F -D D N -S V L I Q -S -G -T T Q Y A M
uvig_332992_CDS_0002 C K D D Y D A L Y G I Y A Y L S E L E -E Q L E I C K E D L W -K A -C -I (98)
DD D + G L + E L
AcrIF2 D A D D A D S I K G Y A D W L D D E A R S A E A S E I E R L L E -S V E E E
uvig_332992_CDS_0002 4 AcrIIA34 0.78 View Alignment uvig_332992_CDS_0002 M T --Q -K -T -R D ----------R L -----------C D -----------L -D -E -I -H M -K (60)
M +
AcrIIA34 M K N I A N -E -I K T I R Y A F E D G R S T Q K S I M R K I K A L T D -Q F E T M D D L I D S -L -N -S -Y -A D -
uvig_332992_CDS_0002 -L H C S I E A ----V R Q S W V A M T Q G E S A ----------P -C K -D -D Y D --A L Y G I Y A Y L S E L (120)
H + + + + + + +
AcrIIA34 T -H Y T W A I T Y F Q L A R I I I S F Q A S N N T T S E K K I D L Q S G P -I E -V -N G K L K I R V T V D E F M A D
uvig_332992_CDS_0002 E E Q ---L -E -I -C K -E -D L W K A C I (144)
+ L K +
AcrIIA34 L A N W E H -L -E -D -I K -K -L A K E L A
uvig_332992_CDS_0002 5 AcrIIA33 0.78 View Alignment uvig_332992_CDS_0002 M T ----Q K T R D ---------R ----L -C D -L ----D ----E ----I ----H M K -L -H -C -(60)
M T L
AcrIIA33 M I K W T G K S T D K G W I R T V E A E -T Y Y K L L E -T -L V D K -G Y I G -D Y I D S D S Q L F H -E -L -A -Y
uvig_332992_CDS_0002 S I E A -V R Q S W V A M T Q G ---E ----S A P C -K D D -Y D A L Y G I -Y A Y L S E L E E Q L -E I C K E D L (120)
+ D + + + +
AcrIIA33 V -S P A -V A D L E D R L N D E H Q V E Q A L E D L E N F -D W N R V F E K L T D Q Q F Q T A I A G C T S Q A Y Y Q E
uvig_332992_CDS_0002 W K A C I (125)
+ +
AcrIIA33 F E V I E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;