3D Structure for uvig_332992_CDS_0002 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 94.59 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_332992_CDS_0002 1 AcrIE1 0.70 View Alignment uvig_332992_CDS_0002 M T ---Q K T R D ----------R -L ----C D ----L -D -E -I -H -M -K L H C -S I E -A V R Q S -(60)
M + + + +
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L -R E S L E E A A S I -L -S -L -I -V -F -Q A E T -L S D -Q A N E L
uvig_332992_CDS_0002 W V A -M T Q G E S A P C ----K D D Y D A L Y -G I Y A Y -L S -E -L -E -E -Q -L -E I C K E D L W K -A -C (120)
+ D+ + D+
AcrIE1 -A N Y I R R Q G L E E A E G A C -R N I D I M R A -K W V E V -C G -E -V -N -Q -H -G I R V Y G D A I D R -D -
uvig_332992_CDS_0002 -I (122)
AcrIE1 V D
uvig_332992_CDS_0002 2 AcrIE6 0.70 View Alignment uvig_332992_CDS_0002 M T Q K T -R D R L C D L D E I H M K L H C S I E A V R Q S W V A M T Q G ---E S A P C K D D Y D A L Y G I -Y A Y L (60)
M++ L ++ ++ YD++
AcrIE6 M N N -D T E V -L E ---Q Q I K A F E L L A D E L K D R L P T L E -I L S P M Y T A V M V T Y D L I G K Q L A -S R
uvig_332992_CDS_0002 -S E -L -E E Q L E I C -K -E D L -W -K ----A -C -I (92)
E LE
AcrIE6 R A -E -L I E I L E E -Q -Y P G -H A A D L S I K -N L C P
uvig_332992_CDS_0002 3 AcrIIC4 0.61 View Alignment uvig_332992_CDS_0002 M T --Q K T R D ------R ---L ----C D L D E I H M -K L H C S I E -A V R Q -S W -V A M T Q G --E -S (60)
M + + L E L S+ + +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G -L F K S A V E -Q F S S -A R D F F K N E N Y S K E
uvig_332992_CDS_0002 A -P C K D D Y D -A L -Y -G I Y -A Y L S E L E E Q L E I C K E D L W K A C I (101)
+ + E + E
AcrIIC4 -L A E ---K -F -N K -E -A V N -E A V E K L Q K A I D L A E K Q G I Q -F
uvig_332992_CDS_0002 4 AcrIC3 0.59 View Alignment uvig_332992_CDS_0002 M T Q K T ----R -D -R ---L ---C D L D E I H M ---K L H C S I E -A V R Q S W V A -M -T Q -G -----(60)
M+ + + S +
AcrIC3 M S I Q V T S T N -G -R T V N L E I E L G S V V A S S G Q V K F M A D K T D R G -L E S R F L V -P E -A -G N R R I
uvig_332992_CDS_0002 -------E S A P C K D D Y D A L Y G I Y A Y L S E L E E Q L E I C K E D L W K A C -I (106)
+ L +E L++ + + KA
AcrIC3 E V A L T G R D L E A A N A L F S E L A A S V E A T N E M Y R E L D A E R A Q I N K A L E G
uvig_332992_CDS_0002 5 AcrVA1 0.54 View Alignment uvig_332992_CDS_0002 M -------T ----Q K -T R D -------R -L C -D -L D ---E I H M K L H --------C S I -E -A (60)
M Q L + K S A
AcrVA1 M Y E A K E R Y A K K K M Q -E -N T K I D T L T D E Q -H D -A L A Q L C A F R H K F -H S N K D S L F L S -E -S A
uvig_332992_CDS_0002 V R Q S -W V A M -T Q G -------------------------------E S A -------------(120)
+ ++ +
AcrVA1 F S -G E F S F E M Q S D E N S K L R E V G L P T I E W S F Y D N S H I P D D S F R E W F N -F A N Y S E L S E T I Q E
uvig_332992_CDS_0002 ----P -------C ----K D -D -Y D A L Y G I Y A Y -L -S -E L E E Q L E ---I C K E -----D L W K (180)
Y + G Y ++E L + +
AcrVA1 Q G L E L D L D D D E T Y E L V Y D -E -L Y T E A M G E Y E E L -N -Q D I E K Y L R R I D E E H G T Q Y C P T G F A
uvig_332992_CDS_0002 A C I (183)
AcrVA1 R L R
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;