3D Structure for uvig_332304_CDS_0029 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 90.71 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_332304_CDS_0029 1 AcrIE6 0.72 View Alignment uvig_332304_CDS_0029 M M T A K E Y V E G K V K S Y T R L A E R C R R E A E A S D -D I V V R A G Y S A R A N V W E M C A E E M D -N V R E M (60)
M + E +E +K LA+ + + + + + + + E
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I E I
uvig_332304_CDS_0029 L ---Q -E E S G E --I -T -Y V (79)
L + I +
AcrIE6 L E E Q Y P G H A A D L S I K N L C P
uvig_332304_CDS_0029 2 AcrIE1 0.65 View Alignment uvig_332304_CDS_0029 M M ----T A ---K E Y ----V -------E -G ----K V ----K -S -Y -T R -L A E ---R C R R E A (60)
M A + L + +
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L -E -E A A S I L S L I V -F -Q -A -E T L S D Q A N E L A N Y I
uvig_332304_CDS_0029 E A S D D -I V V R A G Y S A R A N V W E M C A E E M D N V R E -M L -Q E E S G E I --T -Y -V (110)
+ G + + E G++
AcrIE1 R R Q G -L -E E A E G A C R N I D I M R A K W V E V C G E V N Q -H G I R V Y G D A I D R D -V D
uvig_332304_CDS_0029 3 AcrIIC4 0.62 View Alignment uvig_332304_CDS_0029 M M -T A K --E Y -------------V -E -G ----K V K S Y T R L A E R C R ----R E A E -A S D D I V (60)
M T +K + A
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L -P -K -N H R E P I K G L F K S A V E Q F S S A R D F F -K N E N --Y
uvig_332304_CDS_0029 V R A G Y S A R A N -V -W E M C A E E M D N V R E M L Q E E S G E I T Y V (98)
+ +E + + E +G I+
AcrIIC4 S K E L A E K F N K E -A V N E A V E K L Q K A I D L -A E K Q G -I Q -F
uvig_332304_CDS_0029 4 AcrIF2-IC2 0.56 View Alignment uvig_332304_CDS_0029 M -M T A K E Y ---V -E -G -K -V ---K ---S Y T -R L A E -------R C R -R E A E -A --------(60)
M V + +
AcrIF2-IC2 M A T K T A Q M I A Q Q H -K -D -T V A A C E A A E A I -A I A K D Q V W D G E G ---Y T K Y -T -F D D N S V L I
uvig_332304_CDS_0029 --S D -D -I -V V R A G Y S A R A N V W E M C -A E E M D N V R E -M L -Q -E -E -S G E I T Y V (112)
A + +E ++ +
AcrIF2-IC2 Q S G -T T Q Y A -M D A D D A D S I K G Y A D W L D D E A R S A E A S -E I -E -R -L L E S V E E E
uvig_332304_CDS_0029 5 AcrIC3 0.56 View Alignment uvig_332304_CDS_0029 M M -----------T A K E Y V E -G -K V -K ------S Y T R ----L A E -------R C R R E A E A S (60)
M ++ + +E R +E+
AcrIC3 M S I Q V T S T N G R T V N L E I E L -G -S V -V A S S G Q V K F M A D K T D R G L E S R F L V P E A G N R R I E V A
uvig_332304_CDS_0029 ---D D -I V V R A G Y S A R A N V -W E -M C A -E -E M D N -V R -E -M L Q E E S -G E I -T Y V (113)
D ++ A S A M +
AcrIC3 L T G R D L E A A N A L F S E L A A -S -V E A T -N -E -M Y R E -L D -A -E R A Q I N K -A L E -G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;