3D Structure for uvig_330738_CDS_0029 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 88.36 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_330738_CDS_0029 1 AcrIE6 0.67 View Alignment uvig_330738_CDS_0029 M L K -S D A -E T L E D I N L V I K L L E R V Y Y R E R G V ---T G G -E ----S ----F I T K Q V D E L L D V (60)
M D I + L++ + R + + I KQ+
AcrIE6 M N -N -D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S -P M -Y T A V M V T Y D L I G K Q L A S R R A E
uvig_330738_CDS_0029 M N D I V E -I -L -E ---E -E -G ---E G (85)
+I+E
AcrIE6 L I E I L E E -Q -Y P G H A A D L S I K N L C P
uvig_330738_CDS_0029 2 AcrIE1 0.58 View Alignment uvig_330738_CDS_0029 M L -K --S D ----A -E --------T -----------L E D I N L V I K L L E R V Y Y R E R G -V -T G (60)
M K L I + L +
AcrIE1 M E K K L S D A Q V A L -V -A A W R K Y P D -L R E S L E E A A S I L S L I V F Q A E T L S D Q A N E L A N Y I R R -
uvig_330738_CDS_0029 -G E -----------S F I T K Q V D E L L D V M N D I V E -I -L -E -E E -G ---E -G (110)
E+ N +
AcrIE1 Q -G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R -V -Y -G D -A I D R D -V D
uvig_330738_CDS_0029 3 AcrIIC4 0.57 View Alignment uvig_330738_CDS_0029 M L -K -S D A E ---T ----------L ----E D I N L V I K L L E R V Y Y R E R G V T G ---G -E ----(60)
M S T E I + K + R
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E N Y S K E L A E
uvig_330738_CDS_0029 S F I T K Q V D E L L D V M N D I V E I L E E E G -E G (88)
F V E+++ + +++++E G
AcrIIC4 K F N K E A V N E A V E K L Q K A I D L A E K Q G I Q F
uvig_330738_CDS_0029 4 AcrIF3 0.54 View Alignment uvig_330738_CDS_0029 M L -K S ----D -------A E T -----------------------L E D -I N L -V -I K L L E R V (60)
M A + +
AcrIF3 M S S T I S D R I I S R S V I E A A R F I Q S W E D A D P D N L T E S Q V L A A S S F A A R L H E -G -L Q A T V L Q R
uvig_330738_CDS_0029 Y Y ------------R E R G V -T -G G E --------------------------S -F -I T K -Q (120)
+ S
AcrIF3 L V D E S N R D E Y R E F Q A W E E A L -L N A -D G R V T S N P F A D W G W W Y R I A N V M L A T A S Q N V G V -A W
uvig_330738_CDS_0029 V D -E L L D V M N D I V E I -L -E -E -E -G -E --G (150)
+ I +
AcrIF3 G -S H V H G R L M A I F Q D R -F -Q -Q -H Y E D E E C
uvig_330738_CDS_0029 5 AcrIIA28 0.51 View Alignment uvig_330738_CDS_0029 M L -K ----S -D A E T L -E D I N L V I -K L -L E R V Y Y -R ---E -R -G V T G ---G E ----S ----(60)
M E L + G +
AcrIIA28 M K T I F T K K -Q T E E L L N D I S I E K Q K -E L -F N S M H D F R S Q -H -A -K E A R I P G W S D K Y N K L E K
uvig_330738_CDS_0029 F I T K Q V D E L L D V -M N D I V E I -----L E E E G --E G (94)
+E+ + + L
AcrIIA28 K M L S D F E E V T G I K Y D T L E S E L I W D N L S N K F L Y N S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;