3D Structure for uvig_330048_CDS_0009 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 90.54 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_330048_CDS_0009 1 AcrIIA7 0.68 View Alignment uvig_330048_CDS_0009 M M Y E G C L D F -S A A L E V L K S G G K V S R I G W N G K G M F I Y Y V P S A Y H E P -K ------T ---D -A (60)
M ALE LK G V R GWNGKGMFI P +
AcrIIA7 M T -----F -G -Q A L E S L K R G H L V A R K G W N G K G M F I F M R -P E D S L P T N M I V N Q V K S L P E S -
uvig_330048_CDS_0009 -G -K -H L A ----G -E G -G K V L Y G G F I A M K T A T G E V V P -W L A S Q T D L L A E D W C V Y L F G S E E (120)
+A ++ + MK A G +V WLASQTD LA
AcrIIA7 F -K -R W V A N N H G -D S E T D R I K F T A Y L C M K A A D G T I V N G W L A S Q T D M L A N -D -------W V
uvig_330048_CDS_0009 K A V K G I V M (128)
+ +
AcrIIA7 -I ---V -E
uvig_330048_CDS_0009 2 AcrIIA4 0.52 View Alignment uvig_330048_CDS_0009 M M Y E G C L D F S A A L E V L K S G G K -V S R I G W N G K G M F I Y Y V P S A Y H E P K T D A G K H L A G E G G K V (60)
M ++ +K+ V G +
AcrIIA4 M N --I -N ---D L I R E I K N K D Y T V K L S G T ---------------D S ------------N -S
uvig_330048_CDS_0009 L Y G G F I A M K T A T G E V V P W L A S Q T D L L -------A -E -D W -C V Y L F G S E -------E K -A -(120)
I+ + G S ++ + E +
AcrIIA4 -I T Q L I I R V N N D G N E Y V I S E S E N E S I V E K F I S A F K -N -G W -N Q E Y E D E E E F Y N D M Q -T I T
uvig_330048_CDS_0009 V K G I V M (126)
+K +
AcrIIA4 L K S E L N
uvig_330048_CDS_0009 3 AcrIIA12 0.52 View Alignment uvig_330048_CDS_0009 M M Y E G C L D F S A A L E V L K S G G K V S R I G W N G K G M F I Y Y V P S A Y H E P K -T D A -G -K H -L A -G E (60)
M + ++E++K+ N V +A
AcrIIA12 M S -K -T M Y K N D V I E L I K N A ---K T ---N N E E L L F T S V -E R --N -T R -E A A -T -Q Y F -R C P
uvig_330048_CDS_0009 G G K V -L -Y G G F I A M K T A T G E V V P W L A S Q T D -L L A E D W C V -Y L F G S E E K -A V K G I V M (116)
G E + D + +
AcrIIA12 E K -H V -S D A G V -Y -Y G E D F E F D G -----F E I -F E -D D L I Y T R S -Y ---D -K E -E L N
uvig_330048_CDS_0009 4 AcrIF18 0.50 View Alignment uvig_330048_CDS_0009 M M Y E G C L D F S A A L E V L K S G G K V S R -I G W N -G K G M F I Y Y V P S A Y H E P K T D A G K H L A G E G G K (60)
M
AcrIF18 M T --T I K A A -Y ------I ---S K -D -Q N W N D G T T T Y W F D -V -------------------
uvig_330048_CDS_0009 V L Y G G F I A M K T A T G E V V -P W -L A S Q T D L L A E D W C V Y L F G S E E K A V K G I V M (110)
G ++ + + V F I+
AcrIF18 -N -G E T F G V V H G G E S -W N -A K V V D C D G A P S D Q Y T V D Q F ---N I T E D M I A E
uvig_330048_CDS_0009 5 AcrVIA3 0.48 View Alignment uvig_330048_CDS_0009 M M Y E G C L D F S -A -A -L -E -V -L K S G G K V S R I G W N G K G M F I Y Y V P S A -Y H E P K T D A -G -K -(60)
M G + + + +
AcrVIA3 M F -K ------E -F -L -E -K -C -L R Y G N L Y I L E E -----------T G D -R ---K K -V -K -R
uvig_330048_CDS_0009 H -L A G -E G G K V L Y G G -F I A M K T A T G E V V P W L A S Q T D L L A E D W C V Y L F G S E E -K A V K G I V M (120)
GKV ++ G ++ L + + +
AcrVIA3 -I -S K R -H G K V T E -A S -V L L F D S -G T K R -T T I N -E I Y L N S Q G Y F I I R D Q -K R L K L E K -F K
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;