3D Structure for uvig_32897_CDS_0126 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 94.61 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_32897_CDS_0126 1 AcrIE6 0.73 View Alignment uvig_32897_CDS_0126 M K -D Q E I I Q H L N T ----K L E N L I K E M E N T D -L ------L P I E L N Q M E M D A M R L R G A -I E T (60)
M D+E++ ++ L + + L + + + R IE
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I E I
uvig_32897_CDS_0126 L ---E N -L Q -K ---L -G -L (79)
L
AcrIE6 L E E Q Y P G H A A D L S I K N L C P
uvig_32897_CDS_0126 2 AcrIIC4 0.61 View Alignment uvig_32897_CDS_0126 M -K D Q E -I I -Q ------------------H ----L N T K L E ----N L I K E M E N T D L L P I E L (60)
M + + L + ++ N +
AcrIIC4 M K I T S S N -F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E N Y S K E L A
uvig_32897_CDS_0126 -N Q M E M D A M R L R -G A I -E T L E -N -L Q -K L --G L (93)
+ + + + K
AcrIIC4 E K F N K E A V N E A V E -K L Q -K A I D -L -A E K Q G I Q F
uvig_32897_CDS_0126 3 AcrIE1 0.56 View Alignment uvig_32897_CDS_0126 M -K -D Q ---E I I Q -----------------H -L -N -T -------K -L E -N L I K E M E -N --(60)
M K + ++ + E
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A A S I -L -S -L I V F Q A E T L -S D -Q A N E L A N Y I R
uvig_32897_CDS_0126 -T D L ------L P I E L N Q M E M D A M R L R G A I E -T L -E N L Q K ----L -G -L (108)
+ + + M + G + +
AcrIE1 R Q -G L E E A E G A C R N I D I M R A K W V E V C G E V N Q -H G I R V Y G D A I D -R D V D
uvig_32897_CDS_0126 4 AcrIF25 0.53 View Alignment uvig_32897_CDS_0126 M -K -D Q E --------I I Q --------------------------H L N T -------K L E N L (60)
M D + +
AcrIF25 M D N D D K K P D A L I H L R V P A E V K G R W V K E S R L E G M K L T D W I T G R V E A K A L S I A E V L E E A A A M
uvig_32897_CDS_0126 I K E M E -N --------T D ------------------------L ------------------(120)
++ E +
AcrIF25 A R S L E D S P I F Y R N K L C -A D G I V T I Q Q Q A A R F S A A T D D A T R L D A A L W A R E G Y Q L L S S G L P D
uvig_32897_CDS_0126 ----------L -----P I E L N Q -M E M -D A M R L R G A I E T L E N L Q K L -G L (168)
+A + L + K G
AcrIF25 S Y S G A V P N E G R T G W V T A S Q M A R L F G -G E A L W I E R C Q Q E L G G A G K E D G R
uvig_32897_CDS_0126 5 AcrIC3 0.53 View Alignment uvig_32897_CDS_0126 M K D Q --E I I Q --------------H L N T -------K L E -N L I K E M E N -------------(60)
M Q K + L
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A S S -G Q V K F M A D K T D R G L E S R F L -V P E A G N R R I E V A L
uvig_32897_CDS_0126 -T -D -L -------L -P I -E -L N Q M E M D -A M R L R -G A I -E -T L -E -N -L Q K L G -L (114)
L + + ++K+
AcrIC3 T -G -R -D L E A A N A L F S -E -L A A -S V E A T -N E M Y R E -L D -A -E R -A -Q I N K A L E G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;