3D Structure for uvig_324935_CDS_0033 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 90.78 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_324935_CDS_0033 1 AcrIB1 0.85 View Alignment uvig_324935_CDS_0033 M D N T E N F Q Y K -E E L -L -S K E S L R H -F -M L V G D F C C -G A D N P L N T F L S D D A F D Y A E E K Q G H (60)
M+ + N K + G N + FL + A
AcrIB1 M E -S K N -L R K L L N -E -Y E E I D I N E M -L K N F R S I K N S G T K N D I E I F L H E K A I K F E K S S I S S
uvig_324935_CDS_0033 T Y I L M D N E Y T C I L A F Y T I K A N -A I H T F N I -----------------D --T -N -E -Y -M A L (120)
TY++ E + IL TI ++
AcrIB1 T Y V V F S -E D N E I L G Y F T I A N R S L V -I P K E N F G I L S K T Q Q K K L G N S A A I L -K -N -G -D L M T
uvig_324935_CDS_0033 P V V E I A R I A V D F D F Q -G -N G L G K I L F Y D Y I I P K I K K V S K I I A I Y G I I V F V E S E N G Q G I Q F (180)
+ + G+ L + K+ +I + I + I+F
AcrIB1 S S F L L G Q L G K N Y S D D I E N L I T G R E L L T -F A Y D L F L K I K E L I N V K Y I W L E C Q -N E P K L I S F
uvig_324935_CDS_0033 Y N S L G F K R A N N E I Q K A V G D S Y N E K C E L Y V L K L -D D I K E (218)
Y++ GFK + + + + + ++
AcrIB1 Y Q N F G F K M L E S L -T ---S -E -E -G L K V M I ---M -E L -K
uvig_324935_CDS_0033 2 AcrVA5 0.59 View Alignment uvig_324935_CDS_0033 M D N T E N F Q Y K E E L L S K E S -L R H F M L V G D F C C G A D N P L N T F L S D D A F D Y A E E K Q G H T Y I L M (60)
M E S + +
AcrVA5 M K I -E L --------S ---G -G --Y -I C ---Y S I -----E ---------------------
uvig_324935_CDS_0033 D N E Y T C I L A F Y T I K A N A I H T F N I D T N E Y M A L P V V E I A R I A V D F D F Q G N G L G K I L F Y D Y I I (120)
+ V I + V +G+G L
AcrVA5 -----------------------E -------D E V T I D M V E V T -T -K R Q G I G S Q L I D ----
uvig_324935_CDS_0033 P K I K -K V S K -I -I A I Y G I I V F V -E S ----E -N G Q G I Q F Y N S L G F K R A N N E I Q K -A V G D S Y (180)
+K V + I + + + + I FY S F +
AcrVA5 -M V K D -V A R E -V --G L P I G L Y A Y P Q D D S I -S Q E D L I E F Y F S N D F E Y D P -D ---D ----V -
uvig_324935_CDS_0033 N E K C E L Y V L K L D D I K E (196)
+ L
AcrVA5 -D -G R L -M ---R -W -S
uvig_324935_CDS_0033 3 AcrVIA1_Lse 0.41 View Alignment uvig_324935_CDS_0033 M D -N T E N F Q Y K E E L L S K -E S L R H F M L V G D F C C G A D N P L N T F L S D D A F D -Y A E E K Q G H T -Y (60)
M M A L TFL
AcrVIA1_Lse M I Y Y I K D -L K V ----K G K -I F E N L M -----N K E A V E G L I T F L K K ----A ------E -F E -
uvig_324935_CDS_0033 I L M D N -E Y T C I L A F Y T I K A N A I H T F N I D T N E Y M A -L -P -V V E ---I A R I A V D F D F Q G N G L (120)
I Y+ + + + ++ ++ D
AcrVIA1_Lse I Y S R -E N Y S K Y N K W F E M W K S ----P -T S -S L V -F W -K -N Y S F R C H L L F V I E K -D -----G
uvig_324935_CDS_0033 G K -I L F Y D Y I I P K I K K V S K I I A I Y G I I V F V E S -------E ---N G --Q G I Q F Y N S -----(180)
+ + V I ++ + + +
AcrVIA1_Lse -E C L G I P ---A S V F E S V L Q I Y L A D P F A P D T K E L F V E V C N L Y E C L A D V T V V E H F E A E E S A W
uvig_324935_CDS_0033 ----L G -F K R A N N E I Q K -A V G D S ----Y ----N ----E K --------------------- (240)
++ + D
AcrVIA1_Lse H K L T H N E -T E V S K R V Y -S K D D D E L L K Y I P E F L D T I A T N -K K S Q K Y N Q I Q G K I Q E I N K E I A
uvig_324935_CDS_0033 ---------------------C -E -L -Y -V -L -K L D D I ---K E (283)
+
AcrVIA1_Lse T L Y E S S E D Y I F T E Y V S N L Y R E S A -K -L -E -Q -H S K Q I L K E E L N
uvig_324935_CDS_0033 4 AcrIC11 0.40 View Alignment uvig_324935_CDS_0033 M D N T E N F Q Y -K -E E L -L S K E S L R H F M L V G D F -C C G A D N P L N T F L S D D A F D Y A E E -K Q -G H (60)
M + + + + + + + A +
AcrIC11 M N K E T -Q I -T -A -S A V V G E D K --R L E F L S K H F G V R F A R R G E A L V F A W L L R L A K V P I E W T R
uvig_324935_CDS_0033 T Y I L M D N E Y T C I L A F Y T I K A N A I H T F N I D T N E Y M A L P V V E I A R I A V D F D F Q G N -G L G K I -(120)
+ FY + + I + + +
AcrIC11 L Q Y Y T L S N ----S G F Y L A P --R --------------E -L R I S E C E L ----S A -D -A V -G I
uvig_324935_CDS_0033 L F Y D Y I I P K I K K V S K I I A I Y G -I -I V F V E S ------------E ----N G Q G I Q F Y N S L G F (180)
+ + +Q Y L
AcrIC11 -V A T ----M -L T L R ------Q L -A -H E S A A C V E A D S T Y P A A K L A V T A S V K F A Q Q Y H H L A A
uvig_324935_CDS_0033 K R A -N N E I Q K A V G D S Y N E K C E -L Y V L K L D D I K E (213)
+ +
AcrIC11 -Y S V --K -------H ----A -E -S I N I Y R A -I D
uvig_324935_CDS_0033 5 AcrIA1 0.39 View Alignment uvig_324935_CDS_0033 M D N -T -E --N F -Q Y K ---E E L --L ----------------------S K ---E S ------L (60)
M + + E
AcrIA1 M R S K M I K K E E K D N K I Y I T V --K D E E T G I E W T A V V E K V E F E W C V K Q K E E L E V E -D A E K S V M
uvig_324935_CDS_0033 ------R H F -----M L ------------------------------------------V G (120)
+
AcrIA1 L D Y A L F G N -C A I P K V -T A E E Y K N S L T K Y T G E K M S R L L H I L Y N Y E I V S Q N D T K N I W V T E L S
uvig_324935_CDS_0033 D ----F ----C C G ----------A D N P L N T F -L S D D A F D Y -A E E K Q G H T Y I L -M -D N E Y T (180)
+ + + +
AcrIA1 R C L R R S Y L M R K E -G K T K V G L N E A M K M H I G S G L H -M R L Q S L L R K H G F E T E V R V Q R K T A L G F
uvig_324935_CDS_0033 C I L A F Y T -I K -A N A I H T F N I D T N E Y M A L P V V E I -A R I A V D -F D F Q G N G L G K -I L F Y D Y I I (240)
I+ + V I + D L + +
AcrIA1 Q I V G R I D V Y -D K --------E ------E N V --I Y -E L K Y T H N D K ----L D -S V R -L N N Y L
uvig_324935_CDS_0033 P K I K K V S K I -I A I Y G I -I V F V E S E N G Q G I Q --F Y -N S -L G F K R A N N E I Q K A V G D S ---Y -(300)
+ + +V V + + + ++ K +
AcrIA1 R Q L N Y Y I E M A -N A M K G Y L V I V H A D G -S V E E I K R -D --W -A E ---T -D L E K R A N -A F G I -Y
uvig_324935_CDS_0033 -N --E ---K ----C E -L Y --V L K -L D D -I -K -E (333)
K
AcrIA1 V E E N T L P P K K S R P D A E C -I E -C P F -Y N F C W G K L
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;