3D Structure for uvig_32479_CDS_0042 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 89.13 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_32479_CDS_0042 1 AcrIIA8 0.71 View Alignment uvig_32479_CDS_0042 M L E I N K Q K -M N Y S L Q S G K V P V Y V -T D E D G N I E Y S S Y T D S D G N V I Y Y L D E D G N K I P K T T -G (60)
M + L + EY G K +
AcrIIA8 M S I F T D -M I P -A E L ---L --I --N -------E Y ------------K K G Q S G A K --H --D -
uvig_32479_CDS_0042 E Y T T -G Y E K P V V F Y S S I S N K L S E A L I K E F G V D N ------S -T -N F V Q -I V E D K G K L -P -L (120)
Y + + A+ K N + + +
AcrIIA8 ----N -Y V ---S ----V G R -I M V A I Y K N N S F K N T G T V K Y -Q D S -T H S G -I T M S K -V F -I D
uvig_32479_CDS_0042 S V G S L V W K R S D V R Y K D E K N T I V D E N S A D Y I V K G V A D E G L -T V -D -L F L L Q K N V K (174)
+ + + Y V G T L +
AcrIIA8 G K E Y R I D I ---------------D -T Q H Y E V Q D F D T S G R Q T T L -I L K R I D -L Y G
uvig_32479_CDS_0042 2 AcrVIA3 0.43 View Alignment uvig_32479_CDS_0042 M L E -I N K Q K M -N -Y S L -Q S G K V P V Y V T D E D G N I E Y S S Y T D S D G N V I Y Y L D E D G N K I P K T T (60)
M L
AcrVIA3 M F K E F -L ---E -K -C L R -------------------------------------------
uvig_32479_CDS_0042 G E Y T T G Y E K P V V --F Y S S I S N K L S E A L I K -E F G V D N S T N F V Q I V E D K G -K -L P --L -S -V (120)
Y + + +
AcrVIA3 ------Y G ---N L Y I ------------L E E ------T G D R K K V K R I S -K -R -H G K -V -T -
uvig_32479_CDS_0042 -G S L V W K R S D V R Y K D E K N T I V D E N S A D Y I V K G V A D E G L T V D L F L L Q K N V K (170)
S++ S + N I ++ + + L K
AcrVIA3 E A S V L L F D S G T K R T T I -N E I Y L N S Q G Y F -I I R D ---Q K R L K L E -K ---F K
uvig_32479_CDS_0042 3 AcrIF9 0.39 View Alignment uvig_32479_CDS_0042 M L E I N K Q K M N Y S L Q S G K V P V Y V T D E D G N I E Y S S Y T D S D G N V I Y Y L D E D G N K I P K T T G E Y T (60)
M
AcrIF9 M -----------------------------------------------------------
uvig_32479_CDS_0042 T G Y E K P V V F Y S S I S N K L S E A L I K E F G V D N ------S -T N F -V Q I V E D K G K L P L S V G S L V W (120)
+ + + T+ Q+ K G++
AcrIF9 -K ---A A Y I I K E --------V Q N I N S -E R E G T Q I E -A T S -L S Q A K R I A S K E Q C F H G T V M R
uvig_32479_CDS_0042 K R S D V R Y K D E K N T I V D E N S A D Y I V K G -V -A -D E G L T V D L F L L Q -K N V K (168)
+ +G
AcrIF9 I E -T -----V -----N --G -L W L -A -Y -K -E -D G --K R W V ---D --C Q
uvig_32479_CDS_0042 4 AcrIIA22 0.39 View Alignment uvig_32479_CDS_0042 M L E -I N K Q K M N Y S -L Q S G K V P V Y V T D E D G N I E Y S -S Y -T D S D G N V I Y Y L D E D G N K I P K T T (60)
M+ ++ +
AcrIIA22 M V V E E T R D ---L A E --T --------------A D C V --V ----------------------
uvig_32479_CDS_0042 G E Y T T G Y E K P V V F Y S S I S N K L S E A L I K -E F -G V D N S T N F V Q I V E D K G K L P L S V G S L V W -K (120)
I VD
AcrIIA22 -------------------------I E A -I L -V D D ----------G -------L -R --Y -
uvig_32479_CDS_0042 R -S -D V R Y K D E K N T I V D E N S A D Y I V K G V A D E G L T V D L F L L Q K N V K (165)
R V KDE I+ ++ +
AcrIIA22 R Q L S -V G I K D E N G D I I R I -V ---------P ---------I S T V L I
uvig_32479_CDS_0042 5 AcrIF8 0.38 View Alignment uvig_32479_CDS_0042 M L E I N K Q K M N Y S L Q S G K V P V Y V T D E D G N I E Y S S Y T D S D G N V I Y Y L D E D G N -K I P K T T G E Y (60)
M+ I + +
AcrIF8 M A R I A P N -E -----------------D S ----------------------T ---------
uvig_32479_CDS_0042 T T G -Y E K P V V F Y S S I S N K L S E -A L I K E F G V D ---N S T N F V Q I V E D K -G K L P L S V G S L V W K (120)
Y ++ + ++ + + + V++ +
AcrIF8 ---M --S T --A Y I I F N S S V -A A -V V D T E I A N G A N V T F S T V T V --K -E E I N A N R D F N ----
uvig_32479_CDS_0042 R S D V -R Y K -D E K N T I V D E N S A D Y I V K G V A D -E -G L -T V D L F L L Q K N V K (168)
I + G +K
AcrIF8 ----L -V -N A Q N G K I S R A K R W G N E A S K C E -Y -F G R E I N P T E F -F --I K
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;