3D Structure for uvig_320209_CDS_0022 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 87.46 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_320209_CDS_0022 1 AcrIIA21 0.85 View Alignment uvig_320209_CDS_0022 M K T E F D Y Y Y G A E A E Q F T F V R V P K V L F T D K E H F G S L P N D A R I L Y G F L L E R M S L S R K N N W I D (60)
M +PK+L +D + SL ++Y L +R WID
AcrIIA21 M D -Y ---D -------N E N Y L I P K I L L Q D -D F Y S S L S A K D I L V Y A V L K D R Q I E A L E K G W I D
uvig_320209_CDS_0022 A H N R V Y I I F P I D E I A E I M G V C H E K A L N I L K E L D E Q N G I G L V K K K R R G L G L P S I L Y V K N F I (120)
+Y+ F + E+A + + + L+E + L+ + R + +
AcrIIA21 T D G S I Y L N F K L I E L A K M F S C S R T T M I D V M Q R L E E ---V N L I E R E R V -D -V F Y G Y S L P Y K T
uvig_320209_CDS_0022 I N D G V E S S T E K S N N H S E P Q E (140)
AcrIIA21 Y I N --------------E -V
uvig_320209_CDS_0022 2 AcrIA3 0.48 View Alignment uvig_320209_CDS_0022 M K T E F D Y Y Y G A E A E Q F T F V R V P K V -L F -T D -K E H -F -G S L P N D A R I L Y G F L L E R M S L S R K (60)
M SL + + L E +
AcrIA3 M S F -Y I -M ------Y I K V K E ----M -S E -Q K ---Q -I -S L R S K Q K E L L Q R F F E I A E V D --
uvig_320209_CDS_0022 N N W I D -A H N R V Y I -I F -P I D E I A E -I -M G V ----C H E K A L N I L K E L D E Q N G I G L V K K K R R (120)
+ I + ++ IL+ + Q +K K +
AcrIA3 -----E -N G D L C I P L Y D S S G D L T -L -F K Q D S R K Y Q M Y A Y F R I L R L I K K Q I F --F I K V K -K
uvig_320209_CDS_0022 G L G L P S I L Y V K N F I I N D G V E S S T E K S N N H S E P Q E (154)
L ++ +I V S
AcrIA3 V K R D K K F L C M H S N V I D -Q V K S V L --------E -S
uvig_320209_CDS_0022 3 AcrVA2 0.44 View Alignment uvig_320209_CDS_0022 M K T E ---F D Y Y ----Y -G A -E A -E ----------Q ---F T F -------------------(60)
M+ + F
AcrVA2 M H H T I A R M N A F N K A F -A -N A K -D C Y K K M Q A W H L L N K P K H A F F P M Q N T P A L D N G L A A L Y E L
uvig_320209_CDS_0022 ---------------------------------------------------V R V ------ (120)
+ +
AcrVA2 R G G K E D A H I L S I L S R L Y L Y G A W R N T L G I Y Q L D E E I I K D C K E L P D D T P T S I F L N L P D W C V Y
uvig_320209_CDS_0022 --------------P K V L F -T -D K -E H -F G S -L P N D A R I L Y G F L L E R M S L S -R -K N N W I D (180)
+ I +L+ + +
AcrVA2 V D I S S A Q I A T F D D G V A K H I K -G -F W A -I -Y D I V -E M N G I N H D -V L D F V V D T D -T -D D N V Y
uvig_320209_CDS_0022 A H N R V Y I I F P I D E I A E I M G V ----C H -E K A L N I L K E L D E Q N G -----I ------G -L -V K (240)
+ I+ +AE+ + +++K L
AcrVA2 V P -Q P F I L S S G Q S V A E V L D Y G A S L F D D D T S N T L I K G L L P Y L L W L C V A E P D I T Y K -G -L P V
uvig_320209_CDS_0022 K -------K R R -G L -G L -P -S I L Y V K N -F ---------------I --I N -D -----G ---(300)
++ + F I
AcrVA2 -S R E E L T R P K H S I N K K -T -G A F V T P S E P F I Y Q I G E R L G S E V R R Y Q S I I -D G E Q K R N R P H T
uvig_320209_CDS_0022 ---V ----------------E S S ---T E K S N N ---H S E P Q E (341)
+
AcrVA2 K R P H I R R G H W H G Y W Q G T G Q A K E F R V R W Q P A V F V N S -G R V S S
uvig_320209_CDS_0022 4 AcrIF17 0.41 View Alignment uvig_320209_CDS_0022 M K T E F D Y --Y -Y G A E A -----E ----Q --F -----T F -----V R V P K V L F T D K E H F G -S L (60)
M V V V+
AcrIF17 M F -S E I K F S S L S D H A -L A E L I K M A M E E F Q Q R L I K P G V N T I K T V D V E P V V -L ----H -A -P
uvig_320209_CDS_0022 P N D A R I L Y G F L L E R M S L S R K N N W I D A H N R V Y I I F P I D E I A E I M G V C H E K A L N I L K E L D E Q (120)
F+ + I ++K + +
AcrIF17 S ---D N E M V F I N N C L K K R -R ------A G ----E ----Y ---I H A S M K D K Y R D L T R K Y ---
uvig_320209_CDS_0022 N G I G L V K K K R R G L G L P S I --L Y V K N F I I N D G V E S S T E K S N N H S E P Q E (167)
K P V + E
AcrIF17 -P -Q W F S V K A ----Y P D D L R G S V S K H Y V D Y F T ----K --------K E
uvig_320209_CDS_0022 5 AcrVA3 0.40 View Alignment uvig_320209_CDS_0022 M K T -E --F -D Y Y Y G -----A ----E A -E Q ----F ----------T ----F -------V R -(60)
M + R
AcrVA3 M V G K S K I D W Q S I D W T K T N A Q I A Q E C G R -A Y N T V C K M R G K L G K S H Q G A K S -P R K D K G I S R P
uvig_320209_CDS_0022 ----V --------P K V L F T D --K E H F G S L -P N -D A R I L Y G F L L -E R M S L S R K N N W I D A H N (120)
+ +F + N
AcrVA3 Q P H L N R L E Y Q A L A T A K A K A S P K A G R F E T N T K -A K T -W --T L -K S ----P ---------D N
uvig_320209_CDS_0022 R V Y I I F P I D E I A E I M G V C H E K A -L -N I L K E L D E Q N G I G L -V K K K R R G L G L P S I L Y -V -K N (180)
+ Y + + + V + + +
AcrVA3 K T Y T F T ----------N L M H -F V -R T N P H L F -D P --D D -V V W R T K S --N -G V E W C R -A S S
uvig_320209_CDS_0022 F I I -N D -G V E -S ---S -T E -K -S -N N H S E P Q E (212)
++ + + +
AcrVA3 G L A L L A K R K K A P L S W -K G W R -L -I -S L T K D N K
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;