3D Structure for uvig_320164_CDS_0023 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 89.27 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_320164_CDS_0023 1 AcrIE1 0.72 View Alignment uvig_320164_CDS_0023 M T K Q E F T E L T G I N P T E E E F D -K -I H E L Y M A T G A E M D K Q S F C A A Y K S C K D M T L V N A L Y H S L (60)
M ++++
AcrIE1 M -E K K L S D A Q -----V ----A -L ---------------------------------V ---
uvig_320164_CDS_0023 A F S I N R L K E E R D R I E K E R K -E I N N T F E D L H E R A L A A A D V I L G V A N K N E D K K I Y H Y L N -E -(120)
+ + R+ + + + A + D + +A Y+
AcrIE1 -A A W R K Y P D L R E ----S L E E -A A S I L S L I V F Q A E T L S D Q A N E L A -N --------Y I R R -Q
uvig_320164_CDS_0023 A -A -L -T L I G E Y N V W M M K L S H G Y N M T C D E R E S F F N E I A E L K G Q V A E Y K Y S G K I E K --Y D R (180)
+ A E G
AcrIE1 -G -L -E ------------------E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D
uvig_320164_CDS_0023 E K E N K (185)
AcrIE1 R D V -D
uvig_320164_CDS_0023 2 AcrIIA11 0.63 View Alignment uvig_320164_CDS_0023 M T K Q E F T E L T G I N P T E E E F D K I H E -L Y M A T G A E M D K Q S F C A A Y K S -C -K D M ---T L V N A L (60)
M + D + +
AcrIIA11 M A D M T L R Q F C E R Y R K ---G ---D -F -L A K D R E T Q I E A G W Y ---D W F -C D D K A L A G R L A K I
uvig_320164_CDS_0023 Y H S L -A F S -I N R L K E E R D R I E -K E R K E I N N T F E D L H E ---R -A L A A A D V -I L G V A N K -N -(120)
+ + + +D D GVA
AcrIIA11 W G I -L K G I T S D Y I L D N Y R V W F K N N C P M V G P L Y D D -V R F E P -L D E E Q R D E L Y F G V A I D D K R
uvig_320164_CDS_0023 -----E -D K ------K --I -Y H Y L N E -A -A L -T L I -G E Y N -V W M M K L S H -G Y N M T C D E R E (180)
I G RE
AcrIIA11 R E K K Y V I F -T A R N D Y E N E C G -F N N V R E -V -R Q F -I N G -W E D E L -K N --E E ----F Y K A R E
uvig_320164_CDS_0023 S F F N E I A E L K G Q V A E Y K Y S G K I E K Y D R E K E N K (212)
+E E+ AE ++
AcrIIA11 K K R Q E M E E A N N K F A E I M Q R --A D E I L W N L K E D
uvig_320164_CDS_0023 3 AcrIC3 0.62 View Alignment uvig_320164_CDS_0023 M T K Q E F T E L T G I N P T E E E F D K I H E L Y M A T G A E M D K Q S F C A A Y K S C K D M T L V N A L Y H S L A F (60)
M+ T N + L E
AcrIC3 M S I -Q V T S T ---N -----G R T V -N L ------E ------------I ---------------
uvig_320164_CDS_0023 S I N R L K E E R D R I E K E R K E I N N T F E D L H E R A L -A A A D V I L G V A N K N E D K K I Y H Y L N E A A L -(120)
E + + A K++ + L
AcrIC3 -------E L -----------------G S V V -A -S S G Q V K F M A D K T D R G L E S R F -----L V
uvig_320164_CDS_0023 T -L I G E Y N V -W M M -K L S H G Y N M T C D E R E S F F N E I A E L K G Q V A E Y K Y S ------G K -I E K Y (180)
+ T + E EL +V
AcrIC3 -P E A -G N R -R I E -V A -L -----T G R D L E A A N A L F S E L A A S V E A T N E M Y R E L D A --E R A Q I
uvig_320164_CDS_0023 D R E K E N K (187)
+ E
AcrIC3 N K A L E -G
uvig_320164_CDS_0023 4 AcrIF23 0.58 View Alignment uvig_320164_CDS_0023 M -T K Q E F T E L T G I N P T E E E F D K I H E L Y M -A -T -G A E M D K Q S -F C A A Y K S --C -----K D M (60)
M + Q + + I + G+ D + A + D
AcrIF23 M T N F Q T W L D S A D I P V Q -Q ----N G Q W I D L -E -T G I A Y D P S Y N Y A A N T R R A S -L S P R G I D A
uvig_320164_CDS_0023 -T L -V N A L Y H S L A F S I N R L K E E R -D R I E K E R K E I -N -N T F E D L H E R A L A A A D V I L G V A N K (120)
+ + ++ R KE + + +
AcrIF23 R -A V A K T F G G R A L T G T A R Q K E W A E -K ---I ----R -A ----E K V Q Q M N Q D Q A E M A ---C -
uvig_320164_CDS_0023 N E D K K I -Y H Y -L N -E -A A -L -T L I G E Y N V W M M K L S H G Y N -M T C D E R E S F F N E I A E L K G Q V (180)
+ A I + E F L Q
AcrIF23 -D ----P -S G L -L T -A -A K -F -W I E N ---R -------N -D -S A Q E I A G F V M Q Q K A L L A Q H
uvig_320164_CDS_0023 A E Y K Y S G K ------I ----E -K Y D R E K E N K (210)
K G I
AcrIF23 R S A K A A G Q A D K V A K I A A E Y -N A L T A R W G -F
uvig_320164_CDS_0023 5 AcrIF4 0.57 View Alignment uvig_320164_CDS_0023 M T K Q E ----F T E -L T G I N P T E E E F D K I H E -L Y M A T G A E M D K Q S F C A A Y K S -C K D M T L V N -(60)
M I + + +
AcrIF4 M M T -I S K T D I D -C Y L Q T Y V --V ----I D P V ----------S N G ---W Q -W G I D E N G V G G A
uvig_320164_CDS_0023 A L Y H S L -A -F -S I N -R L K E E R D -R I E K E R -K -E I -N -N T F E D -L H -E R -A L A -A A D V I L G (120)
L + E T + A+
AcrIF4 -L ----H -H -G R -V E M V E G E -N G Y -----F -G L -R -G A T H P -T -E K -E A M A -A A L G Y ---
uvig_320164_CDS_0023 V -A -N -K N E D K K -I Y H Y L N E A A L T L I G E Y N V W M -M K L S H G Y N M T C D E R E -S F F N E I A E L K (180)
++ +
AcrIF4 -L -W -K ------C ----R Q D -----------L V A -I A R -----------N --------D -
uvig_320164_CDS_0023 G Q V A E Y K Y S G -K -I -E K Y D R E K E N K (205)
AcrIF4 ------A ---I -E -A -E K Y -R -A K A
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;