3D Structure for uvig_316985_CDS_0027 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 88.44 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_316985_CDS_0027 1 AcrIE6 0.66 View Alignment uvig_316985_CDS_0027 M K V D L ---S N Q E L I D I -Y -S -C -I G -S -G I L -S N T E I I D K L K D R E -------K L T S R -M E (60)
M Q + + ++ L L +
AcrIE6 M N -N D T E V L E Q Q I K A -F -E -L -L A -D -E L K -D R L P T -L E I L S P M Y T A V M V T Y D L I G K Q L A
uvig_316985_CDS_0027 E D N K R Y H L L I S K I F N -L -I -D W ---K -K -A (90)
++ K
AcrIE6 S R R A E L I E I L E E Q Y P G -H -A A D L S I K N L C P
uvig_316985_CDS_0027 2 AcrIE1 0.60 View Alignment uvig_316985_CDS_0027 M K --V D L ----S N -Q -------E -------L I D I Y S C ----I -G -S -G I -L -S -N -T E I I (60)
M + + ++ I S +E++
AcrIE1 M E K K L S D A Q V A L -V -A A W R K Y P D L R E S L E E A A S I L S L I V F Q -A -E -T L -S -D -Q -A N E L A
uvig_316985_CDS_0027 D K L K D -R -E ---K L -T S R M E E D N K R Y H L L I S K I F -N L I ----D W ---K -K A (111)
++ + + + + + +
AcrIE1 N Y I R R Q -G L E E A E G A C R N I D I M R A K W V E V C G E V -N Q H G I R V Y G D A I D R D V D
uvig_316985_CDS_0027 3 AcrIIC4 0.57 View Alignment uvig_316985_CDS_0027 M K -V D L ----------------S -N Q -E -L -I -D -I -Y ----S C I G S G I L S N T E I I D K L K (60)
MK + S +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P -K N -H -R -E -P -I -K G L F K S A V E Q F S S A R D F F K N E N
uvig_316985_CDS_0027 D R E -K L T S R M E E D N K R Y H L L I S K I F N L I D W -K -K A (95)
+ E ++K+ L++
AcrIIC4 Y S K E L A E K F N K E A V N E A V E K L Q K A I D L A E K Q G I Q F
uvig_316985_CDS_0027 4 AcrIF23 0.56 View Alignment uvig_316985_CDS_0027 M -K V -D L ---------S N Q -E -------L I --------D I ------Y -------------(60)
M +N +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
uvig_316985_CDS_0027 ------------------S -----C ------------I G S -G -I L -S N -T -E I I D K L K D R (120)
S L I+ D
AcrIF23 G R A L T G T A R Q K E W A E K I R -A E K V Q -Q M N Q D Q A E M A C D -P S G -L -L T A -A -K F W I E N R N D S
uvig_316985_CDS_0027 E K ----L -----------T S R M -E E D N -K -R -Y -H -L -L I S K I F N L I D W -K -K -A (175)
+ ++ L
AcrIF23 A Q E I A G -F V M Q Q K A L L A Q H R S A K A A G Q A -D -K -V -A -K I A A E Y N A L T A -R -W -G F
uvig_316985_CDS_0027 5 AcrIIA28 0.55 View Alignment uvig_316985_CDS_0027 M K V D L ----S -N -Q -E -L I D I --------Y S C I G S G I L S N T E I I D K --L -K D -R ---E -K (60)
MK L DI + + + D E
AcrIIA28 M K T I F T K K Q -T -E -E -L L N D I S I E K Q K E L F N S M H D F R S Q H A K E A R I P G W S -D K Y N K L E K -
uvig_316985_CDS_0027 -L -T S R M E E D N K R Y -H L L I S K I -F -N L -I D W -K --K A (97)
S EE + L S + +
AcrIIA28 K -M L S D F E E V T G I K Y D T L E S E L I -W D -N L S N K F L Y N S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;