3D Structure for uvig_315221_CDS_0002 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 91.68 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_315221_CDS_0002 1 AcrIB1 0.90 View Alignment uvig_315221_CDS_0002 M L N T --F E T ---------------I --S I T -G S Q S A H D V D N F L K N K S V I F D K Q G L S R T H L (60)
M + S + D++ FL+ K + F+K+ +S T +
AcrIB1 M -E S K N L R -K L L N E Y E E I D I N E M L K N F R S I K N S G T K N D I E I F L H E K A I K F E K S S I S S T Y V
uvig_315221_CDS_0002 V F S S Y K G Q T I L V G Y F T I S N K P L I F T K R M L D K C S K T L K K K L Y Q K G E T H S S N D N L I I Q G Y L V (120)
VFS + ++GYFTI N+ L+ K SKT KKL + N L + L+
AcrIB1 V F S -E --D N E I L G Y F T I A N R S L V I P K E N F G I L S K T Q Q K K L G N S A A I -L K N G D L M T S S F L L
uvig_315221_CDS_0002 A Q I G K N Y S K E A L A T K A I N G K D L L T L A Y E M I E S G A K I F G G S Y I W V E Y E D T E K L K R Y Y K D F G (180)
Q+GKNYS + +I+G++LLT AY+ + YIW+E KL Y FG
AcrIB1 G Q L G K N Y S D -D -I E N L I T G R E L L T F A Y D L F L K I K E L I N V K Y I W L E C Q N E P K L I S F Y Q N F G
uvig_315221_CDS_0002 F T E I E N H T S E N G L K M A I L K -I (201)
F +E+ TSE GLK I
AcrIB1 F K M L E S L T S E E G L K V M I M E L K
uvig_315221_CDS_0002 2 AcrVA5 0.58 View Alignment uvig_315221_CDS_0002 M L N T F E T I S I T G S Q S A H D V D N F L K N K S V I F D K Q G L S R T H L V F S S Y K G Q T I L V G Y F T I S N K (60)
M E + GY S
AcrVA5 M -K -I E -L ------------------------------------------S G G Y I C Y S I -
uvig_315221_CDS_0002 P L I F T K R M L D K C S K T L K K K L Y Q K G E T H S S N D N L I -I Q G Y L V A Q I G K N Y S K E A L A T K A I N G (120)
+ + + + G
AcrVA5 -----E ----------------------------E -D E V T I D M V E V T -----T -K R Q G I G
uvig_315221_CDS_0002 K D L L T L A Y E M I E S G A K I -F G G S Y I W V E Y E -----D -T E K L K R Y Y K D F G F T E I E N H T S E N G (180)
L+ + + + G I + +E L Y F
AcrVA5 S Q L I D M V K D V A R E ----V -G -L P I G L Y A Y P Q D D S I S Q E D L I E F Y F S N D F E Y D P D D --V -D
uvig_315221_CDS_0002 L K M A I L K I (188)
+
AcrVA5 G R L M -R W S
uvig_315221_CDS_0002 3 AcrVIA1_Lse 0.41 View Alignment uvig_315221_CDS_0002 M L N T F E T I S I T G S Q S A H D V D N F L K N -K S V I F -D K Q G L S R T H L V F S S Y K G Q T I -L -V G Y F T (60)
M+ + + G T
AcrVIA1_Lse M I Y Y I K D L K V --------K G K I F -E N -L ---M ----------------N K E -A -V E G L I T
uvig_315221_CDS_0002 ---I S N -K P L I F T K R M L D K C S K T L K K K L Y Q K -G -E T H S S N D -N L -I ----I -Q -G Y L -V - (120)
I ++ K + ++
AcrVIA1_Lse F L K K A -E -F E I Y S R E N Y S ----K Y N K W F E -M W -K -S P -T S S L V -F -W K N Y S F -R -C H L -L
uvig_315221_CDS_0002 A -Q I G K N Y S K E A L A T K A -I N G K D L L ------------T ----L A Y E M I E S G A K I F G G S Y I (180)
I K + + + + +
AcrVIA1_Lse -F V I E K -D ---G -E C L -G -I P A S V F E S V L Q I Y L A D P F A P D T K E L F V E V C N L Y E C L A D V T V
uvig_315221_CDS_0002 W V E Y E -------D -------------------T -------E -K L K -R Y Y K D --F G F T E I E (240)
E K + I
AcrVIA1_Lse V E H F E A E E S A W H K L T H N E T E V S K R V Y S K D D D E L L K Y I P E F L D T -I A T N K K -S Q K -Y N Q I Q
uvig_315221_CDS_0002 N H T S ------------E --------N ----G ------L -----K -M A I L K -I (292)
+ + K +
AcrVIA1_Lse G K I Q E I N K E I A T L Y E S -S E D Y I F T E Y V S N L -Y R E S A K -L E Q H S K Q I L K E E L N
uvig_315221_CDS_0002 4 AcrIB9 0.40 View Alignment uvig_315221_CDS_0002 M L N T F E T I S I --T G S Q S A H D V D N F L K N K S V I F D K -Q --G L S R T H L V F S -S Y K --G Q -T I -(60)
M N F + +++ V + + K +V S +
AcrIB9 M -N K F A F E N D K Y -L E R N I K A V V E K I A R D F N L H L K S K Y S K D C E F T V V A D N S F D N I E -N S -T
uvig_315221_CDS_0002 L V G Y F T I -S ----N --K P L I -F T K R M L D K C S K T L K K K L Y Q K G E T H S S N D N -L I --I Q ---(120)
+ + ++
AcrIB9 -I F L E I K R N D G K A -C Q D H H -I Y A E Y E -C -D --E ---D ----------D N -E -Y I A L T V K F
uvig_315221_CDS_0002 -----G -Y L V A Q I --G K N Y S K E A L A T K A I N G K D L L T L A Y -E M I E S G A K I F G G S Y I W V E Y E (180)
+ ++ K+ D + + I
AcrIB9 Y G S S A -S N Q I N T V Q G I K S S K -----Y A S C I V S D T D N Q L -S K S I H E L N L K K E K -E Q Q E A W N
uvig_315221_CDS_0002 D ----T E K L K -R Y Y K D F G F T E I E N H T S -E N G -L -----K M -A I L K I (226)
+ K Y E I
AcrIB9 K K E A E Y A R K K Q A Y V S Q S Q R E K Y E D I F D L P F -D F Y D Y I D -K K E Q G L I
uvig_315221_CDS_0002 5 AcrIB2 0.40 View Alignment uvig_315221_CDS_0002 N /A (3)
N/A
AcrIB2 N /A
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;