3D Structure for uvig_315137_CDS_0055 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 95.49 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_315137_CDS_0055 1 AcrIB1 0.83 View Alignment uvig_315137_CDS_0055 M F S E E A V ---------Y -D ----F S C F D C -----G E T S L N D F L N N R L A Q Q H S G R I L R G Y L (60)
M + D F + + FL +++ I Y+
AcrIB1 M E -S K N L R K L L N E Y E E -I D I N E M L K N F R S I K N S G T K N D I E I F L H E K A I K F E K S S I S S T Y V
uvig_315137_CDS_0055 L L T R D P I P K V M G F Y T L S G -S C F A R -N ---T -L P S N T Q Q R K V -----P ----Y S D A P S V T L (120)
+ + + + G T+ S + S TQQ+K+ S L
AcrIB1 V F S -E -D N E I L G Y F T I A N R S L V I P K E N F G -I -L S K T Q Q K K L G N S A A I L K N G D L M T S S F L L
uvig_315137_CDS_0055 G R L A I D K S I -Q -R Q G Y G E T L V A H A M K V V Y R A S L A V G I Y A L F V D -A K N E N A M R F Y K Q L G F T (180)
G L S G L+ A + ++ ++ + ++++ + FY + GF
AcrIB1 G Q L G K N Y S D D I E N L I T G R E L L T F A Y D L F L K I K E L I N V K Y I W L E C Q N E P K L I S F Y Q N F G F K
uvig_315137_CDS_0055 P L T G -D --N A N S L F Y P T K G I E K L F -G G K (208)
L K
AcrIB1 M L E S L T S E E G L ---------K V M I M E L K
uvig_315137_CDS_0055 2 AcrVA5 0.55 View Alignment uvig_315137_CDS_0055 M F S E E A V Y D F S C F D C G -E T S L N D F L N N R L A Q Q H S G R I L R G Y L L L T R D P I P K V M G F Y T L S G (60)
M E+ C
AcrVA5 M K -I E L S G G Y I C --Y S I ------------E ------------------------------
uvig_315137_CDS_0055 S C F A R N T L P S N T Q Q R K V -P Y S D A P S V T L G R L A I D K S I Q R Q G Y G E T L V A H A M K V V Y R A S L A (120)
VT+ + + + RQG G +L+ + V+
AcrVA5 -----------------E -----D E V T I D M V E V T -T -K R Q G I G S Q L I D M V K D V A R E -V --
uvig_315137_CDS_0055 V G I Y A L F V D A ---K ----N E N A M R F Y K Q L G F T P L T G D N A N S L F Y P T K G I E K L -F G G K (177)
G + + A +E + FY + F D
AcrVA5 -G -L P I G L Y A Y P Q D D S I S Q E D L I E F Y F S N D F E Y D P D D V D ----G -----R L -M R -W S
uvig_315137_CDS_0055 3 AcrIC11 0.39 View Alignment uvig_315137_CDS_0055 M F S E E A V Y D F S C F -D -C -G E T S L N D F L N N R L A Q Q H S -G R I --L R G Y L L L T R --D -P I P K V (60)
M E S GE +FL+ + LL
AcrIC11 M N K -E T Q I T A S --A -V -V G E D K R L E F L S K H F G V R F A R R G E A L -V F A W L L R L A K V P I E W T R
uvig_315137_CDS_0055 M G F Y T L S -G S C F A R N T L P S N T Q Q R K V P Y S D A P S V T L G R L A I D K S I Q R Q G Y G E T L V A H A M K (120)
YTLS + + + +V
AcrIC11 L Q Y Y T L S N S G F Y L A -P -----------R ---E -L R I S E C E ---L ------S A D A V G I -V A
uvig_315137_CDS_0055 V V Y R A S L A V G I Y A L F V D -A ---K -----------------N E N A M R F Y K Q L G F T P L T G D N (180)
+ + + Y+ L +
AcrIC11 T M L T L R Q -L A -------H -E S A A C V E A D S T Y P A A K L A V T A S V K F A Q Q Y H H L A A Y S V -K --
uvig_315137_CDS_0055 A N S L F Y P T K G I E K L F G G K (198)
+ I ++
AcrIC11 -H ---A E S I N I Y R A I --D
uvig_315137_CDS_0055 4 AcrVIA1_Lse 0.38 View Alignment uvig_315137_CDS_0055 M F S E -E A V Y D ----F S C F D C G E T S L N -D F L N N R L A Q Q H S G -R I L R G Y L L L T R D P I P K V M G (60)
M + F N + + L++ R+ K
AcrVIA1_Lse M I Y Y I K D L K V K G K I F E N -L M -----N K E -A V E G L I T F L K K A -E F E -I Y -S -R E N Y S K Y N K
uvig_315137_CDS_0055 F Y T L -S G S C F A R N T L -P S N T Q Q R K V P Y S D -A P S V T L G R L A I D K S I Q R Q G Y G E T L V A H A M K (120)
+ + L ++ A +
AcrVIA1_Lse W F E M W K S P T S -S L V F W ------K -----N Y S F R C H L L F V I E K -D G E C L ---G I P -A S V F E
uvig_315137_CDS_0055 V V Y R A S L A V G I Y A L F V D A ---K -------N E ------N A M R F Y K Q -L -G F T P L T G -----(180)
V + LA F+ ++ + LT
AcrVIA1_Lse S V L Q I Y L A D ----P F A P D T K E L F V E V C N L Y -E C L A D V T V V E H F E A E E S A W H K L T H N E T E V
uvig_315137_CDS_0055 ------D -N -------------------A --------N S L F Y P T -K G I ------------ (240)
+ K
AcrVIA1_Lse S K R V Y S -K D D D E L L K Y I P E F L D T I A T N K K S Q K Y N Q I Q G K I Q E I -N K E -I A T L Y E S S E D Y I
uvig_315137_CDS_0055 --------E ----K L -------F -G -G K (268)
KL
AcrVIA1_Lse F T E Y V S N L Y R E S A K L E Q H S K Q I L K E E L N
uvig_315137_CDS_0055 5 AcrIIA21 0.38 View Alignment uvig_315137_CDS_0055 M F S E E A V Y D F S C -F D C G E T S L N D F L N N R L A Q Q H S G R I L R G Y L L L T R D P I P K V M G F Y T L S G (60)
M +
AcrIIA21 M D Y --D -N E ---N -----Y -------L ---------------------------------
uvig_315137_CDS_0055 S C F A R N T L P S N T Q Q R K V P Y S D A P S V -T L G R L A I D K -S I Q R Q G Y G E T L V A H A M K V V Y R A S L (120)
+ L + + A + A L
AcrIIA21 ---------------------I -P K I -L L Q D D F Y S S --L -S A K D I L V Y A V L K D R Q I E A -L
uvig_315137_CDS_0055 A V G I -----Y -A L F V D A --------K ---N E ---N A M R F Y K Q L G F T P -L T G D N A N S L F Y P (180)
G + +M + +
AcrIIA21 E K G W I D T D G -S I Y L -N F K L I E L A K M F S C S R T T M I D V M Q R L E E V N L I E R E R -V D V F Y G Y S L
uvig_315137_CDS_0055 T K G I E K L F G G K (191)
+
AcrIIA21 P Y K T Y -I N -E V
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;