3D Structure for uvig_313743_CDS_0063 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 95.23 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_313743_CDS_0063 1 AcrIB1 0.84 View Alignment uvig_313743_CDS_0063 V D F L E A N C T F C V L ---D -K K K ----L E C C N N F S --C E H E D L D D F F N N E S Y L Y S D E L L G K S (60)
+ + + L L + + D++ F + +
AcrIB1 M E ----S K N L R K L L N E Y E E I D I N E M L K N F R S I K N S G T K N D I E I F L H E K A I K F E K S S I S S T
uvig_313743_CDS_0063 Y C F Y L N T D P S E I V C A F T V S N A -S I K V S ----D -L P S S R K S R I R S K I P H -E -K H S N S F P A V (120)
Y +EI+ FT+ N + L + ++ + +
AcrIB1 Y V V F S -E -D N E I L G Y F T I A N R S L V I P K E N F G -I L S K T Q Q K K L G N S A A I L -K N G D L M T S S F
uvig_313743_CDS_0063 L I G R L G V N C K F -K -R K G I G N E L M D F I K A W F I D P H N K T G C R F I I V D A Y N E T A P L S Y Y E K N D (180)
L+G LG N G EL F+ F+ + + I ++ NE +S Y
AcrIB1 L L G Q L G K N Y S D D I E N L I T G R E L L T F A Y D L F L K I K E L I N V K Y I W L E C Q N E P K L I S F Y Q N F G
uvig_313743_CDS_0063 F I Y M F S T E T Q E A K C T G K N S T E P L K T R L M Y F D L I I L K S (217)
F S + ++M L
AcrIB1 F K M L E S L T -S ------E ----E -G L K V M I M -E --L -K
uvig_313743_CDS_0063 2 AcrVA5 0.60 View Alignment uvig_313743_CDS_0063 V D F L E A N C T F C V L D K K K -L E C C N N F S C E H E D L D D F F N N E S Y L Y S D E L L G K S Y C F Y L N T D P (60)
E
AcrVA5 M K I E L -----------S G -G Y I C Y S I -------------------E --------------
uvig_313743_CDS_0063 S E I V C A F T V S N A S I K V S D L P S S R K S R I R S K I P H E K H S N S F P A V L I G R L G V N C K F K R K G I G (120)
V I + V+ KR GIG
AcrVA5 ----------------------------------E -----D E V T I D M V E V T -T -K R Q G I G
uvig_313743_CDS_0063 N E L M D F I K A W F I D P H N K T G C R F I I V D A --Y ----N -E T A P L S Y Y E K N D F I Y M F S T E T Q -E (180)
+ L D +K + I + A + Y NDF Y +
AcrVA5 S Q L I D M V K D V A R E ----V -G L P I G L Y A Y P Q D D S I -S Q E D L I E F Y F S N D F E Y D P D -D --V -
uvig_313743_CDS_0063 A K C T G K N S T E P L K T R L M Y F D L I I L K S (206)
R S
AcrVA5 --------D ----G R ----L M -R W -S
uvig_313743_CDS_0063 3 AcrIA1 0.39 View Alignment uvig_313743_CDS_0063 V D -F L ---E -A -N C T F C -V -L --------------D K -----K K ---L E C ----------(60)
E N V + K LE
AcrIA1 M R S K M I K K E E K D N K I Y I T V K D E E T G I E W T A V V E K V E -F E W C V K Q K E E L E -V E D A E K S V M L
uvig_313743_CDS_0063 -------C N N -----------F -S C E -H E D L D D -F F N N E S Y L Y S D E -L L G K S Y C F Y L N T D (120)
C + E K+ +
AcrIA1 D Y A L F G N C A -I P K V T A E E Y K N S L T K Y T G E K M S -R L L H I L Y N Y E I V S Q N D T K N I W V T E L S R
uvig_313743_CDS_0063 P S E I V -C A ----F T V S N A -S I K V S D ------L P S S R K S R I R S K I P H E K H S -N -S ------(180)
+ + + S + R+ S + +
AcrIA1 ---C L R -R S Y L M R K E --G K T K V G L N E A M K M H I G S G L H M R L Q S L L R K H G -F E -T -E V R V Q R
uvig_313743_CDS_0063 --F P -A -V L --------------I G R L G V N -C K F K R K -G I G N -E L M D -F I K -A W -F I D P H (240)
I L + +
AcrIA1 K T A -L G F Q -I V G R I D V Y D K E E N V I Y E L K Y T H N D K L D -S V R -L N N -Y L R Q -L N Y -Y I -E M -
uvig_313743_CDS_0063 N K -T G C R F I I V -D A Y -N ----E ---T A P L S Y Y E K N ---D F ------I -Y -M F S T E T Q E A K (300)
+ + E + EK
AcrIA1 --A -N A M K G Y L V I V H A D G S V E E I K R D W A E T D L E K R A N A F G I Y V E E N -T -L P P K K S R -P D -
uvig_313743_CDS_0063 C T G K N -S T E P L K T R L M Y F D L -I -I L --K S (329)
E K
AcrIA1 ---A E C -I E ----C ---P F -Y -N F C W G K L
uvig_313743_CDS_0063 4 AcrVIA1_Lse 0.38 View Alignment uvig_313743_CDS_0063 V D -F L E A N C T F C V L D K K K L E C C N N F S C E H E D L D D F F N N E S Y L Y S D E L L G K S Y C F Y L N T D P (60)
+ V K E E L F Y
AcrVIA1_Lse M I Y Y I K D ---L K V -K G K I F E N L M -N K E A V E G L I T F L K K A --------E F E --I -Y S R E N Y
uvig_313743_CDS_0063 S E I V C A F T V S -N A S ---I K V S D L P S S R K S R I R S K I P H E K H S N S F P A V L I -G R L G V N C K F K (120)
S F + + + + N + +
AcrVIA1_Lse S K Y N K W F E M W K S P T S S L V F W ---------K -----------N Y S F R C H L L -F V I E K -D -G
uvig_313743_CDS_0063 -R K G I G N E L M D F I K A W F I D P H N K T G C R F I I V D -A Y N E T A P L S Y Y E K N D F -I Y M F S T E T Q E (180)
GI + + + + F+ + YE E E
AcrVIA1_Lse E C L G I P A S V F E S V L Q I Y L A ---D --P -F A P D -T K E L F V E V C N L Y E C L A D V T V V E H F E A -E
uvig_313743_CDS_0063 A K C T G -K N S -T E ---P ---------L K --------------------T ----------R L (240)
+ +
AcrVIA1_Lse --E S A W --H K L T H N E T E V S K R V Y S K D -D D E L L K Y I P E F L D T I A T N K K S Q K Y N Q I Q G K I Q E
uvig_313743_CDS_0063 M -----------------------Y F --------D -L -I I ---L K S (286)
Y I +
AcrVIA1_Lse I N K E I A T L Y E S S E D Y I F T E Y V S N L Y R E S A K L E Q H -S -K Q I L K E E L N
uvig_313743_CDS_0063 5 AcrIIIB2 0.38 View Alignment uvig_313743_CDS_0063 V D F L E A N -C T -F C -V L D K K K L E C -C N N -F S C E H E D L D D F F N N E S Y -L Y S D E L L G K S Y C F Y (60)
+ + + +
AcrIIIB2 M E ---K -A -Q V -E K K -----V K -A Y Y -F -F S N D D ---S -------L --D S S R -L S L L V I K
uvig_313743_CDS_0063 L N T D P S E I V C A F T V --S N A -S -I K V S D L P S S R K S R I R S K I P H E K H S N S F P A V L I G R L G V N (120)
+ N V S V++
AcrIIIB2 T --H -F G V Y Q Y I I K K A I N K D -V F Y V P ---L -----------------S -K K V I L K L W -S D
uvig_313743_CDS_0063 C K F K R K G I G N -E L M D F I K A W F I D P H N K T G C -R F I -I V D A Y N --E T A P L S Y Y E K N D F I Y M F (180)
G + Y L+ +
AcrIIIB2 --K ----K G -N L -L F S F I P ---------I -S -P P I F L S D Y E V V N F D L L N V A D D I S G N L L V
uvig_313743_CDS_0063 S T E T Q E A K C T G K N S T E P L K ----T ---------R L -M -Y F ----D L I I L K -S (232)
T K++ + L+ L S
AcrIIIB2 D T ----S ----K S Q I D I K G L S S L -L N A I K D I T G V N V -P -T D V L V L L A Y L L S S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;