3D Structure for uvig_312271_CDS_0045 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 84.63 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_312271_CDS_0045 1 AcrIE6 0.72 View Alignment uvig_312271_CDS_0045 M S K V E L R L N G L I D A L K N K I D E L R K S K E L E -K -A F L D D E L E V N D N E Q M Y T Q F K V I C K Y D S K (60)
M+ L I A +DEL+ + L
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L ---P -T -L --E I L ---S -P M Y T A V M V T Y D L I G K Q
uvig_312271_CDS_0045 L M I L E E I L K -S ---L E -Y V R --T G E Y K R E D K (91)
L L K
AcrIE6 L A S R R A E L I E I L E E Q Y P G H -A A D L S I K N L C P
uvig_312271_CDS_0045 2 AcrIE1 0.66 View Alignment uvig_312271_CDS_0045 M S -K ---V E L R L N --------------G -L -I -D -A -L -K -N -K -I -D E -L R K -S K E -L E (60)
M K + + L
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E -E -A -A -S -I -L -S -L -I -V F -Q -A E T L -S D -Q
uvig_312271_CDS_0045 K A F L D D E L E V N D N E Q M Y T Q F K V I C K Y D S K L M I L E E -I L K S L E Y V R T G E Y K R -E D K (115)
L + + E + I K + + V G+ +
AcrIE1 A N E L A N Y I R R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V -Y G D A I D R D V D
uvig_312271_CDS_0045 3 AcrIIC4 0.61 View Alignment uvig_312271_CDS_0045 M S -K -V E L -R --L ---N --------G -L I D A L K N K I D E L R K S K E L E K A F L D -D E L E V N D N (60)
M + +K + + + F + +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K -N H R E P I K G L F K S A V E Q F S S A R D F F K N E N Y --S K -
uvig_312271_CDS_0045 -E Q M -Y T Q F -K V I -C K Y D S K L M I L E E I L K S L E Y V R T G E Y K R --E D K (106)
+ + E L + +
AcrIIC4 E -L A E ----K -F N K E ----A V N E A V E K L Q K A I D L -A E K -Q -G I Q -F
uvig_312271_CDS_0045 4 AcrIF2-IC2 0.54 View Alignment uvig_312271_CDS_0045 M -S K V E L R ---L N G L I D A L ---K N K I D E L R -K S K E L -E K A F L D -D -E L E ---V N -D N E Q M (60)
M +K A+ I + + DN
AcrIF2-IC2 M A T K T A Q M I A Q Q H K D T V A A C E A A E A I A I A -K D Q V -W D G -----E -G -Y T K Y T F -D D N S V L
uvig_312271_CDS_0045 Y T -Q F K V I ----C K Y D S K L M I L E E I -L K S L E Y V R T G ---E -Y K R -E -D K (109)
+ + + + + E
AcrIF2-IC2 I Q S -G T T Q Y A M D A D D A D S I K G Y A D W L D D E A R S A E A S E I E R L L E S V E E -E
uvig_312271_CDS_0045 5 AcrIF23 0.54 View Alignment uvig_312271_CDS_0045 M S K V ---E L R L N ----G L I D ----------------------------------------(60)
M+ +
AcrIF23 M T N F Q T W L D S A D I P V Q -Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
uvig_312271_CDS_0045 ----------------A L K N K I D -E -L R -K S K E -L -E K A F L -D D E L E V N D N E Q M Y T Q F K V (120)
++ L +
AcrIF23 G G R A L T G T A R Q K E W A E K I R A E K V Q -Q M -N Q D Q -A -E M A C D -P -S G L L T A A K F W I E N R N D S
uvig_312271_CDS_0045 I C K -Y -D S K -L M I -L E -E I L K S L E Y V R -T ------G ----E -Y K R E ---D -K (172)
+ +M +L + ++ Y
AcrIF23 A Q -E -I A G -F V M -Q Q -K A L L A Q H R S A K A A G Q A D K V A K I A A -E Y N A L T A R W G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;