3D Structure for uvig_311085_CDS_0002 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 95.36 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_311085_CDS_0002 1 AcrIIA21 0.71 View Alignment uvig_311085_CDS_0002 M E V T V N K T E S D Q N N P Y C I V N I A A N R G -A L E T L T K S A Y C L Y M Y F M Q N Q ----D -------G (60)
M+ N ++ ++ +L+ +Y Q + G
AcrIIA21 M D Y -D N E -------N -Y L I P K I L L Q D D F Y S S L S A K D I L V Y A V L K D R Q I E A L E K G W I D T D G
uvig_311085_CDS_0002 -F T L K L R R N H A M S V T N L S K S S Y H R A M A E L I E K G Y L V D C -G -D G --Y E F --Y E -E P E -E -E (120)
L + + + S+++ +M L E +
AcrIIA21 S I Y L N F K L I E L A K M F S C S R T T M I D V M Q R L E E V N L I E R E R V D V F Y G --Y S L P Y K T Y I N -E -
uvig_311085_CDS_0002 L (121)
+
AcrIIA21 V
uvig_311085_CDS_0002 2 AcrIA3 0.49 View Alignment uvig_311085_CDS_0002 M E -V T -V N K T E S D Q N N P Y C I ---V N I A A N R G A -L E T --------------L ---------(60)
M K + + + + E
AcrIA3 M S F Y I M Y I K V K E M S E Q K Q I S L R S K Q K E L L Q R -F F E I A E V D E N G D L C I P L Y D S S G D L T L F K
uvig_311085_CDS_0002 -T K S A Y -C -L -Y M Y F M Q N Q D G F T L K L R R N H A M S V -T N -L S K S S Y H -R A M A E L I E K G Y -L V (120)
Y Y ++ + L
AcrIA3 Q D S R K -Y -Q -M Y A Y -F R I L R ---------L ----I -K K --Q I F F -I K V -K K V K R D K K F L C
uvig_311085_CDS_0002 D C G D G Y E F Y E E P E E E L (136)
+ E
AcrIA3 M H S N V I D Q V K S V L E -S
uvig_311085_CDS_0002 3 AcrIE5 0.43 View Alignment uvig_311085_CDS_0002 M E V T V N K T E S D Q N N P Y C I V N I A A N R G A L E T L T K S A Y C L Y M Y F M Q N Q D G F T L K L R R N H A M S (60)
M + + + T
AcrIE5 M S N -D ---R N G -----------I I N -Q I I D Y T -------------------G --------
uvig_311085_CDS_0002 V T N L S K S S Y H R A M A E L I E K G Y L V D C -----G -D G Y E F Y -E ----E P E E -E L (111)
+ R+ EL + G +
AcrIE5 ---T D R D H A E R I Y E E L R A D D R I Y F D D S V G L D R Q G L L I R E D V D L M A V A A E I E
uvig_311085_CDS_0002 4 AcrIF16 0.43 View Alignment uvig_311085_CDS_0002 M E V T V N K -T E S D Q -----N N P ------------Y -C I V N I A A N R G A ---L ---E T -----(60)
M ++ K + +VN +
AcrIF16 M S L S D K K E --Q K E A Y L D A -L -R I A P L D R G V L K R I H -A V N D N T L D K W L Y V A D R Y P -T F R A C
uvig_311085_CDS_0002 ------------------------------------L -------T K S A Y C L Y M Y F M Q N Q D (120)
KS L +
AcrIF16 W E L W M F Q R K R R V L I S R K L H V L I N R S T N R T I E A F E K T Y P P E E R V V G K S Y R D L V T E K G E R S A
uvig_311085_CDS_0002 ----G F T L K L R R N H A M S V T -N L S K S S Y H R A M A -E L I -E K G Y L V D C G ---D G Y E F Y E E P E - (180)
+ A + SSY + G G
AcrIF16 N M Y I I N G E V V G A K D A S I L L G Y ---S S Y N T L Y -A K M -K R L G I -Q P -G D D I S H L K P E K R G R K
uvig_311085_CDS_0002 E -E L (184)
AcrIF16 K E C S
uvig_311085_CDS_0002 5 AcrVIA7 0.41 View Alignment uvig_311085_CDS_0002 M E V T -V N K T -----E S D -Q ------------------N N P -Y C I V N I A A N ----------(60)
M + + S P + +
AcrVIA7 M R I I K L Y E R I I P K T S S T S Y I S R W E A L N I P D E N R N T A A W H P R T Y L F S Y D -K D K A I N L Y N T T
uvig_311085_CDS_0002 ----R G -A L -E T --------L ----T K S A Y C L Y -M Y -F M Q N Q D G F T L K L R R N H A M S -V T N (120)
+ + +L +N +
AcrVIA7 N V L G N S G -I K K -R I I D Y P S K R E V Y I A N F P R A -I A D -L -V L T M K D Y Q L S S L H N C -C N D F --
uvig_311085_CDS_0002 L S K S S Y H R A M A E L I E K G ---Y L V D -C -G D G Y E F -Y E E P E E -E L (163)
+ + L + F +
AcrVIA7 F N E D E T E Q L Y Q Y L R S I K D N R R V D -E -F L K Y E -F T V R Y F N D K K F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;