3D Structure for uvig_308270_CDS_0107 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.47 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_308270_CDS_0107 1 AcrIB1 0.74 View Alignment uvig_308270_CDS_0107 M K -I E L I A L T ---E ----D -N -M K Q C F E L K V A G S Q M Q Y I A S N E -D S -W -K -E A K E N E K I A (60)
M L L E K+ +K G+ + + I
AcrIB1 M E S K N L R K L L N E Y E E I D I N E -M L K N F R S I K N S G T K N D I E I F L H E -K A -I -K -F E K S -S I S
uvig_308270_CDS_0107 R P F A I Y -C D E K I V G F T M F A F --------D -E -----------K ------Y -E -D S N D R Y W (120)
++ D I+G A +
AcrIB1 S T Y V V F S E D N E I L G Y F T I A N R S L V I P K E N F G I L S K T Q Q K K L G N S A A I L K N G -D L M T S S F L
uvig_308270_CDS_0107 L W R F M I D E N L -Q -G N G Y ----G -T -A -A -L -Q -V -I -I -K -Y -F R -E -H G A N N I R L S T K E (180)
L + + I L
AcrIB1 L G Q L G K N Y S D D I E N L I T G R E L -L -T -F -A -Y -D -L -F -L -K -I K -E -L I N V K Y I W L E C -Q
uvig_308270_CDS_0107 T N T T A L S M Y R K A G F R D T G E M --N D E E I V L Q L -N L (214)
+ ++S Y GF+ + V
AcrIB1 N E P K L I S F Y Q N F G F K M L E S L T S E E G L K V M I M E L K
uvig_308270_CDS_0107 2 AcrVA5 0.71 View Alignment uvig_308270_CDS_0107 M K I E L I A L T E D N M K Q C F E L K V A G S Q M Q Y I A S N E D S W K E A K E N E K I A R P F A I Y C D E K I V G F (60)
MKIEL + +
AcrVA5 M K I E L ---S G ---G Y I C -Y S I --------E ------------------------------
uvig_308270_CDS_0107 T M F A F D E K Y E D S N D R Y W L W R F M I D E N L Q G N G Y G T A A L Q V I I K Y F R E H G A N N I R L S T -K E -(120)
D + + + +G G+ ++ + RE I L
AcrVA5 -----------E -D E V T I D M V E V T -T -K R Q G I G S Q L I D M V K D V A R E V -G L P I G L Y A Y P Q D
uvig_308270_CDS_0107 ---T -N T T A L S M Y R K A G F R D T G E M N D E E I V L Q L N L (155)
+ ++ Y F + + +
AcrVA5 D S I -S Q E D L I E F Y F S N D F E Y D P D D V -D G R L M R W -S
uvig_308270_CDS_0107 3 AcrIIC3 0.39 View Alignment uvig_308270_CDS_0107 M K I E --L I A L T E D N M K Q C F E L K V A -G -S -Q M -Q Y I A S N E D S W K E A K E N E -K I A R P -F A I -(60)
M + + + + E A
AcrIIC3 M F K R A I I F T S F N G ----F E K V --S R -T -E -K R R L A K I I N A R V S I I D E Y L R A K D -T N -A -S
uvig_308270_CDS_0107 Y C D E K I V G F T M F A F D E K Y E D S N -D R Y W L W R F M I D E N L Q G N G Y G T A A L Q V I I K Y F R E H G A N (120)
D F F + T L +
AcrIIC3 -L D G Q Y R A F L -F --N -------D --------------E -S P A M T E F L A K L K A F A E S C T G I
uvig_308270_CDS_0107 N I R L S T K E T N T T A L S M Y R K A G F R D T -G E M -N D E E I V L Q L N L (161)
+I + + + + +
AcrIIC3 S I D A W E -I E E S E Y V R L P V -E R R D F L A -A -A -N G K E -I -F K I
uvig_308270_CDS_0107 4 AcrVIA1_Lse 0.39 View Alignment uvig_308270_CDS_0107 M K --I ----E -L -I A L -----T E ----D -N -M -K -Q C ----F -E -L -K V A G S Q M Q Y I A S N (60)
M I + + +
AcrVIA1_Lse M I Y Y I K D L K -V -K G K -I F E N L M N K E A V E G -L -I -T -F L K K A -E -F -E I Y S R E N Y S K Y N K W
uvig_308270_CDS_0107 E D S W K E ---A K E -N ---E K I A R --P F A I Y C D E K I V G F T M -------F A -F ----------(120)
+ WK F+I D +G +
AcrVIA1_Lse F E M W K S P T S S L -V F W K N Y S F R C H L L F V I E K D G E C L G I P A S V F E S V L Q I Y L A D P F A P D T K E
uvig_308270_CDS_0107 -----D --E -K ------Y E D -S N D R Y W L W -R F -M I D -----E -N L Q G N G Y G T ----A A L Q (180)
E +W + + +
AcrVIA1_Lse L F V E V C N L Y E C L A D V T V V E -H F E A E E S A W H K -L T H N E T E V S -K -R V Y S K D D -D E L L K Y I P
uvig_308270_CDS_0107 V I I K Y F R E H G A ----N N I R L S T -K -E -T N T T A L S M Y R K -A G F ---R D T G E M N D E ------(240)
+ N+I N +++ Y E
AcrVIA1_Lse E F L D T I A T N K K S Q K Y N Q I Q G K -I -Q -E I N K E I A T L Y E S S E D Y I F T E Y V S N L Y R E S A K L E Q
uvig_308270_CDS_0107 --E I V L Q L -N L (251)
+L
AcrVIA1_Lse H S K Q I L K E E L N
uvig_308270_CDS_0107 5 AcrIF16 0.38 View Alignment uvig_308270_CDS_0107 M K -I ---E L I A L -------T E -----------D ---N M K Q C F E L -K V A G S Q M Q Y I A -S N E (60)
M E + + +
AcrIF16 M S L S D K K E Q K E A Y L D A L R I A P L D R G V L K R I H A V N D N T L D K W L Y V A D R ---Y P ----T -F R
uvig_308270_CDS_0107 D S W K E A K E N E K I -A R P F A I Y C D E K I V G F T M -F A F D E K Y E D S N D -R Y W L W R F M I D E N L Q G N (120)
W + R + K + E Y
AcrIF16 A C W E L W M -F Q R -K -R R V L --I S R K -L H V L I N R S T N R T I E A F E K T -Y P P E E R ---------
uvig_308270_CDS_0107 G Y G T A A L Q V I I -K Y F R E -H G ---A N N I R L S -T -K E ------------T -N -T T A L S M Y R K (180)
+ +G AN ++ +T+ ++
AcrIF16 V ----V G K S Y -R D L V -T E K G E R S A N M Y I I N G -E V V G A K D A S I L L G Y S -S -Y N T L Y A K M K R
uvig_308270_CDS_0107 A G F R D T G E M N ----D -E -E I V L Q L N -L (207)
+G G+
AcrIF16 L G I Q P -G D D I S H L K -P -E K R G R K K E C S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;