3D Structure for uvig_300575_CDS_0048 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 91.24 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_300575_CDS_0048 1 AcrIC9 0.71 View Alignment uvig_300575_CDS_0048 M -F ---L W L -C -W Y V N D E W G C Y I I A P T R G R A K S I F N S Y W R N I C Y G E Y T D V R A T K I K A A D G (60)
M + Y T + + A I
AcrIC9 M E T K M T S F Y K -I T A Y -N S Q A L Y -F W G T D A D V D R Y -V D W L N R D R E I --N V Y A A E A I P E -A E
uvig_300575_CDS_0048 Y E E A V L D M D C E T L A A ---L -D V -H -Y R L E E (90)
+ + + +E
AcrIC9 W -A Q Y -E G R D D V -L S G E E -C G W D D F M S A E A
uvig_300575_CDS_0048 2 AcrIIA27 0.69 View Alignment uvig_300575_CDS_0048 M F L W L C W -Y V --------N --D -E W G C Y I I A P T R G R A K S I F N S Y W R N I C Y G E Y T D V R A T K (60)
M + + + A +R A
AcrIIA27 M K T F N I I V S E S A N L K E H S S E L V D N I I Y K V E A K N R R E A F K K A R E E Y S F S S K W K F -N --M R D
uvig_300575_CDS_0048 I K A A D G Y E E A V L D M D C E T L A A L D V -H Y R L E -E (92)
+ A+D A R+E
AcrIIA27 L T A I D N -------T H -R --R A W G R R Y L R V E E A
uvig_300575_CDS_0048 3 AcrIE2 0.63 View Alignment uvig_300575_CDS_0048 M F L W L C W Y V --N -D --E W G C -Y I I A P T R G R A K S I F N S Y W R N I C Y G E Y T D V R A T K I K A A --(60)
M L N E + + + S +I E +
AcrIE2 M N T Y L I D P R K N N D N S G E R F -T V D A ---V -D I T A A A K S A A Q Q I L G E E F E G L V Y R E T G E S N G
uvig_300575_CDS_0048 D G Y E E A V L D M D C ---E T -L A -A L D V H Y R -L E E (92)
G A E
AcrIE2 S G M F Q A Y H H L H G T N R T E T T -V -G Y P F H -V M E L
uvig_300575_CDS_0048 4 AcrIIA33 0.59 View Alignment uvig_300575_CDS_0048 M F L -W L C W Y V -N D E W G C Y I I A P T R G R A K S I F N S Y W R N I C ----Y G -E -------Y T D ---(60)
M W + A + + +
AcrIIA33 M I K W T G K --S T D K G W I R T V E A E ---T Y Y K L L E T L V D K G Y I G D Y I D S D S Q L F H E L A Y V S P A
uvig_300575_CDS_0048 ----------V -R A -T K -I -K A A ---D G Y E E ---A V L -D -M -D -C E T -----L A A -L D V H (120)
+
AcrIIA33 V A D L E D R L N D E H Q -V E Q A -L E D -L E N F D W N R V F E K L T D -Q -Q -F Q T A I A G C T S Q -A Y Y Q E
uvig_300575_CDS_0048 Y R L E E (125)
+ E
AcrIIA33 F E V I E
uvig_300575_CDS_0048 5 AcrIC8 0.57 View Alignment uvig_300575_CDS_0048 M F L W L C -W Y --V --------N -----D E W G C Y I I A P T R G R A K S I F N S Y W R N I C Y G E Y T -D (60)
M + + + TR A
AcrIC8 M Y A --I R -K I Q F F Y G P T D K K S Y V G E E A G G R -R E L F K T R A E A Q A R I E -D L -------E -E -
uvig_300575_CDS_0048 -V R A ---T K --I K A A D G Y E E A V L D M D C -E T L A A L D V H Y R L E E (102)
++ + +
AcrIC8 G -V Y Y L A --H N E S G -R P D -Y K I V W V R G E A Q -F --E H A R W M R G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;