3D Structure for uvig_299443_CDS_0052 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 90.46 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_299443_CDS_0052 1 AcrIC9 0.70 View Alignment uvig_299443_CDS_0052 M -K ----Y Y Y I E R I N T Q D G H R N G F Y T Q K A E N L E K V L F A F D E G E S D C G L Y A P R V A E I T E A E (60)
M Y I + V D D + + + I EAE
AcrIC9 M E T K M T S F Y K I T A Y ---N -S Q A L Y F W ---G T D A D V D R Y V D W L N R D R E I N V Y A A E A I P E A E
uvig_299443_CDS_0052 Y E N -F --P Y F L P K N W --V Y G -T --E E E (87)
+ L E
AcrIC9 W A Q Y E G R D D V L S G E E C G W D D F -M S A E A
uvig_299443_CDS_0052 2 AcrIIA27 0.66 View Alignment uvig_299443_CDS_0052 M K Y Y Y I E -R -I N T --Q -D G -H R N -G F Y T Q K A E N L E K V L F A F D E G E S D C G L Y ---A -P R V A (60)
MK I + Y A N + E S +
AcrIIA27 M K T F N I I V S E S A N L K E H S S E L V D N I I Y K V E A K N R R E A F K K A R E E Y S F S S K W K F N -M R D L T
uvig_299443_CDS_0052 E I T E A E Y E N F P -Y F L -P K N W V Y G T E E E (87)
I + EE
AcrIIA27 A I D N T H ----R R -A W G -R R Y -L R V E E A
uvig_299443_CDS_0052 3 AcrIE2 0.61 View Alignment uvig_299443_CDS_0052 M K Y Y Y I E R I N T Q D G H R N G -F -Y -T -Q K -A E N L E K V L F A F D E G E -S D C G -L Y A -P -R V A --(60)
M Y I+ ++ ++ + A + G
AcrIE2 M N T Y L I D P R K N N -D N S G E R -F -T -V -D A ---V D -I T A A A K S A A Q Q I L G E E F E G -L V Y R E T
uvig_299443_CDS_0052 -E I T E A -E Y E N F P Y F -------L -P K N -W -V Y G T -E E E (98)
E + E
AcrIE2 G E S N G S G M F Q A Y H H L H G T N R T E -T T V -G Y P -F H -V M E L
uvig_299443_CDS_0052 4 AcrIIA20 0.58 View Alignment uvig_299443_CDS_0052 M K Y Y Y I E R I N T Q D G H R N -G F Y T Q K A E N L E K V L F A F D E G E S D C -G L -Y -A P R V A E I T E A E Y (60)
MK Y + + + +E++ ++ + E S + + ++ +
AcrIIA20 M K N Y E V T N E --V ---K -N -L N -T Q V E T I G Q A V D L Y K E Y G S N T I V -W -S I D K N E D L I D E V T
uvig_299443_CDS_0052 E N F P Y F L P K N W V Y G T E E E (78)
E + GT
AcrIIA20 E L V A E Y A ----E K G T V I K
uvig_299443_CDS_0052 5 AcrIC8 0.56 View Alignment uvig_299443_CDS_0052 M K Y Y Y I E R I N T ---Q D ------G -H R N G F Y T Q K A E N L E K V L F A F D E G E S D C G L Y A P R V A E (60)
M I +I+ G + + ++
AcrIC8 M Y -A -I R K I Q F F Y G P T D K K S Y V -G E E A G G R R E L F K T R A E A Q A R I E D -L -----E E G V Y Y L
uvig_299443_CDS_0052 I T E -A E Y E N ---F P Y F -L -P K N -W V Y G -T -E --E E (95)
+ +
AcrIC8 A H N E S G -R P D Y K I -V -W -V -R G E A Q F -E H A R W M R G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;