3D Structure for uvig_298657_CDS_0037 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 94.11 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_298657_CDS_0037 1 AcrIF11 0.77 View Alignment uvig_298657_CDS_0037 M -K -L F H G S Y E N T A P V I K V G A F A M S G D -N I F D G I F A C S D F D V A G S H G N F V Y S Y N -V E I I A (60)
M LFHGSYE + I+ +F G+F + + A SHG + +
AcrIF11 M S M E L F H G S Y E E -I S E I R D S -------G -V F G G L F G A H E K E T A L S H G E T L H R I I S P L P L T
uvig_298657_CDS_0037 D N G D -L H D R I A D V I S F L R S E V E A D E E Q L E A L A Y A L A D D E C D D A F A D I L S P R T D S A D E F -A (120)
D I + + + DE +EA+ + E
AcrIF11 D Y A -L -N Y E I E S A W E V A L D V A G G D E N V A E A I M A K A C --E S -------------D ----S -
uvig_298657_CDS_0037 A A S W E M Q R L R G R A A A H L G F D A V E M E D E H G T S Y L I V N P A V -K G E (163)
WE QRLRG +A++LG VEMEDEHGT+ L +
AcrIF11 N D G W E L Q R L R G V L A V R L G Y T S V E M E D E H G T T W L C L P G C T V E K I
uvig_298657_CDS_0037 2 AcrIB8 0.51 View Alignment uvig_298657_CDS_0037 M K L F H G -S Y ----------------E -N T A P V I K V G A F A M S G D N I F D -G -I F A C S D F D V A (60)
MK N G + + D
AcrIB8 M K T I D R D E -I A K D I N A C I K G L G R D I R T N W E L G F E E G Q I I T L ----E -R -Y E S W T T G G D F T
uvig_298657_CDS_0037 G S H -G N F V Y S Y N V E I I A D N G D L H D R I A D V I S F L R S E V E A D E E Q L E A L A Y A L A D D E C D D A F (120)
Y +E + +
AcrIB8 V C N D C P V E Y H F E I E N E V P C H V V D Y ----------------------------------N -
uvig_298657_CDS_0037 A D I L S P R T D S A D E F A A A S -W E M Q -R -L R G R A A A H L G F D A V E -M E --D --E --H G T S Y L I V (180)
+E +A+ + +++ +G + + G +I
AcrIB8 ---N K ------E E V I A L G A E D C -E -D -E N E V L L P A G T K L E V V Y G E H E D D N E E M G F Y T V I F
uvig_298657_CDS_0037 N P A V -K G E (188)
+
AcrIB8 K Y -L E E E K
uvig_298657_CDS_0037 3 AcrIIA33 0.46 View Alignment uvig_298657_CDS_0037 M K L F H G S Y ---E N T A P V I K V G A F A M S G D N I F D G I F A C S D F D V A G S H -G N F V Y S Y N V E I I A (60)
M + A + I
AcrIIA33 M I K -W T G K S T D K G W I R T -V ---------E ------A E -T Y Y K L L E T L V D K G -Y ----I G D
uvig_298657_CDS_0037 D N G D L H D R I A D V I S F L R S E V E A D E E Q L E A L A Y A L A D D E -C D D A F A D I L S P R T D S A D E F A A (120)
+++ + L L + +L
AcrIIA33 Y I D S D S Q L F H E L A Y V -------S -P A V A D L E D R L ----N D E H Q V E Q A L E D L ---------
uvig_298657_CDS_0037 A S -W -E -M Q R L R G R -A A A -H -L -G F -D A V E M E D -E --H G -T S Y L I V N P A V -K G E (174)
+R + F A+ E
AcrIIA33 --E N F -D W N R -V F E K L -T D -Q -Q -F Q T A I A G C T S Q A Y -Y Q -E -------F E V I E
uvig_298657_CDS_0037 4 AcrIIA26 0.44 View Alignment uvig_298657_CDS_0037 M K -L F H G S Y E N T A P V I K V G A F A -M S G -D N I F D G I F A --C S D F D V A G S ----H --------(60)
MK L + + C F + S
AcrIIA26 M K K L Y I Q T N Q F A N G E L Q -----V --E N ----T S --Y E L C D T F K E L Y S V A S N -L V D E N T L N
uvig_298657_CDS_0037 -----------------------------------------G N F V Y S Y N V E I I A D N G D -L (120)
+ +
AcrIIA26 F V E D N F I E Q N Y K D E Y N G V Y E N D G D T G E F V G Q V F E N K V T E E Q F K E L L E Q L E I T Y T E F D -P -
uvig_298657_CDS_0037 H D R I A D V I S F L R S E -V E A D E E Q L E A -L A Y A L A D D E -C -D -D A -F A D I L S -P -R T D S A D E F (180)
+ ++ + + + A+ L
AcrIIA26 E E E ---L A K C I A N -K ----N R K -S E F ----Y -G N -G -L -K -V I -A E Y L E S -I --------
uvig_298657_CDS_0037 A A A S W E M Q R L R G R A A A H -L -G -F D A V E -M E --D ------E ---H G -T S Y L I V N P -A V -K -(240)
++ F + G
AcrIIA26 -----S -H E D A L A V V T -Y -Y -Y F Y F G F G Y -E D Q L I S D I K D D Q E D G V K F E H ---V E --R S E
uvig_298657_CDS_0037 G E (242)
AcrIIA26 T I
uvig_298657_CDS_0037 5 AcrIC1 0.44 View Alignment uvig_298657_CDS_0037 M K L F H G S Y E N T A P V -I K V G -A F A M S G D N I -F D G I F A C S -D F D V A G S H -------------(60)
M K DG+FA V+GS
AcrIC1 M N N -----------L -K K T A -I T ------H -D G V F A Y K N T E T V I G S V G R N D I V M A I D A T H
uvig_298657_CDS_0037 --------------------------G ---N F V Y S Y N V E I I A D N -G D L H D R I A D V I S F L R (120)
V + + ++ +
AcrIC1 G E F N D K N F I I Y A D T N G N P I Y L G Y A Y L D D N N D A H I D L A V G A C N E D D D ---F D E K E I H E M I A
uvig_298657_CDS_0037 S E V E -A -D E E Q L E A L A Y A L A D D E C D D A F A D I L S P R T D S A D E F A A A S W E M Q R L R G -R A A A H (180)
E + + + A
AcrIC1 ----E -Q -M E L A K R Y ----Q E ---------L --------------G D T V H G T -T R L A F D D
uvig_298657_CDS_0037 L G F D A V E M E ---D -------------------------------E -----H -G -T S Y L I V (240)
G V + +
AcrIC1 D G Y M T V R L D Q Q A Y P D Y R P E N D D K H I M W R A L A L T A T G K E L E V F W L V E D Y E D E E V N S W D -F D
uvig_298657_CDS_0037 -N P A V K G E (248)
+
AcrIC1 I A D D W R E L
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;