3D Structure for uvig_297309_CDS_0048 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 97.29 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_297309_CDS_0048 1 AcrIIA4 0.86 View Alignment uvig_297309_CDS_0048 M T F K Q A L E E I -K K G N K V K H K S W D S L I V T E -F -S N N I V C -L E D K R S Y Y Y ---P Y D L E D F K K (60)
M+ ++ EI K VK DS + ++++ + + Y + E
AcrIIA4 M N I N D L I R E I K N K D Y T V K L S G T D S ---N -S -I -T Q L I I R V N N D G N E Y -V I S E S E N E S I V E
uvig_297309_CDS_0048 T -F -V -K -L K K G W I L -V -G D ----D -E ----Y K E F F Q (97)
K GW + K +
AcrIIA4 K F -I -S -A F K N G W N Q E Y E D E E E F Y N D M Q T I T L K S E L N
uvig_297309_CDS_0048 2 AcrIIA12 0.83 View Alignment uvig_297309_CDS_0048 M -T ---F K Q A L ---E E I -K -K -G N K V K H -K S ----W -D S L I V T E F S ----N N I -V C L E D K (60)
M ++ + + + + V +
AcrIIA12 M S K T M Y K N D V I E L I K N A K -T -N N E E L L F T S V E R N T R E A A T Q Y F R C P E K H V S D A G V Y Y G E D
uvig_297309_CDS_0048 R S Y Y Y P Y D L E D F K K T F V K L K K G W I L V G D D E Y K E -F F Q (97)
+ F ++ KE +
AcrIIA12 ---------F E -F D G F E I F E D -D L I Y T R S Y D K E E -L N
uvig_297309_CDS_0048 3 AcrIIA33 0.82 View Alignment uvig_297309_CDS_0048 M -T -F K Q A L -----E -E I K K -------G -------N K V K H K ----S -------W D S L I V T (60)
M + + S S +V
AcrIIA33 M I K W T G K S T D K G W I -R T V -E A E T Y Y K L -L E T L V D K G Y I G D Y I D S D S Q L F H E L A Y V S P A V A
uvig_297309_CDS_0048 E F S N N I V C L E D -------K -R S -Y Y Y P Y D L -E D -F -K K T F V K L K K G W I L V G -D -D -E -Y K (120)
+ + + +F + G
AcrIIA33 D L E D R L N D E H -Q V E Q A L E D L E N F D W N R -V F E K -L -T D Q Q F Q T A I A G C T S Q A Y -Y -Q -E F E
uvig_297309_CDS_0048 E F F Q (124)
AcrIIA33 V I -E
uvig_297309_CDS_0048 4 AcrIF15 0.81 View Alignment uvig_297309_CDS_0048 M T F K Q A -L E E I K K G --N K V K -H K ---S W D S L I V T E F S N N I V C L E D K R S Y Y Y P Y D L E D -F K (60)
MT ++ E+ +K + V+ + +E
AcrIF15 M T T I T I A -Y E V S N D K V E T I K T -M V E S Q Q -I H N V N F -N G E E F T I E R G D F T S I -D --K -D -E
uvig_297309_CDS_0048 K T F V K -L K K G W I -L V G -D -D -E Y K E F F Q (88)
VK + +
AcrIF15 A E H V K L ----L N K ---I -Q -D I I H G Y -S
uvig_297309_CDS_0048 5 AcrIIA7 0.81 View Alignment uvig_297309_CDS_0048 M T F K Q A L E E I K K G N K V K H K -S ---------------------------------------(60)
MTF QALE +K+G V +K
AcrIIA7 M T F G Q A L E S L K R G H L V A R K G W N G K G M F I F M R P E D S L P T N M I V N Q V K S L P E S F K R W V A N N H
uvig_297309_CDS_0048 -W ---D S L I V T E F S N N I V C L E D K -R S Y Y Y P Y D L E D F K K -T -F -V K L K K G -W I L -V G -D D E (120)
D F + +C + +
AcrIIA7 G D S E T D R ---I K F -T A Y L C M K A A D G T I ----V ----N -G -W -L -A S Q --T -D M L A N D ---
uvig_297309_CDS_0048 Y K E F F Q (126)
AcrIIA7 W V I V -E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;