3D Structure for uvig_295656_CDS_0004 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 90.51 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_295656_CDS_0004 1 AcrVIA2 0.73 View Alignment uvig_295656_CDS_0004 M W K C K K C G G E V -I A I V E S D D S F E F S -L D K Y G N P N E F L S Y T T E D V E Q I -V K Q K -I N I V G M Y (60)
MWKCKKCG + + + E DK G L +
AcrVIA2 M W K C K K C G C D R F Y Q D I -T G G I S E V L E M D K D G E ---V L -------D E -I -D D -V -E Y G D F S
uvig_295656_CDS_0004 C E D C D I E I E D L K E E A ----V --------W -E D (92)
C CD + E A + +
AcrVIA2 C A K C D N S S S K I Q E I A Y W D E I N G K N K T Y L S K D K
uvig_295656_CDS_0004 2 AcrIIA26 0.46 View Alignment uvig_295656_CDS_0004 M W -K C -K K C -----G ---------------------------------------------(60)
M G
AcrIIA26 M K K L Y I Q -T N Q F A N G E L Q V E N T S Y E L C D T F K E L Y S V A S N L V D E N T L N F V E D N F I E Q N Y K D
uvig_295656_CDS_0004 -------------------------------------G E ---------V -I A I V E S D D S F (120)
+ + +
AcrIIA26 E Y N G V Y E N D G D T G E F V G Q V F E N K V T E E Q F K E L L E Q L E I T Y T E F D P E E E -L A K C I A N K N R K
uvig_295656_CDS_0004 E F S L D -K Y G N P N E -F -L S Y T T E D V E Q I V K Q K I N I V G -M Y C E D C D I E I E D L K -E E A V ----(180)
E S + ED+ +V G Y + +I D + +
AcrIIA26 S E F Y G N G L K V I A E Y -L E S I S H E D A L A V V T Y Y Y F Y F G F G Y E D Q L I S D I K D D Q E D G V K F E H V
uvig_295656_CDS_0004 -W -E -D (186)
E
AcrIIA26 E R S E T I
uvig_295656_CDS_0004 3 AcrIIA22 0.46 View Alignment uvig_295656_CDS_0004 M W K C K K C ----G ---G E V I A -I V E S D D S F E F S L D K Y G N P N E F L S Y T T E D V E Q I V K Q K -I N (60)
M VI I +
AcrIIA22 M V -V E E T R D L A E T A D C V V I E A I -L V ---------D ----D ---------G -L R ----Y R Q
uvig_295656_CDS_0004 I V G M Y C E D C D I E I E --D L K E E A V W E D (86)
+ ++ I + +
AcrIIA22 L S V G I K D E N G D I I R I V P I S T V -L --I
uvig_295656_CDS_0004 4 AcrIC1 0.46 View Alignment uvig_295656_CDS_0004 M W K -C -K -K C -----G --------------------------------------------(60)
M
AcrIC1 M N N L K K T A I T H D G V F A Y K N T E T V I G S V G R N D I V M A I D A T H G E F N D K N F I I Y A D T N G N P I Y
uvig_295656_CDS_0004 --------------------------------------------------G E V ---I -A - (120)
V
AcrIC1 L G Y A Y L D D N N D A H I D L A V G A C N E D D D F D E K E I H E M I A E Q M E L A K R Y Q E L G D T V H G T T R -L
uvig_295656_CDS_0004 I V E S D D S F E F S L D K Y G N P N E F L S Y T T E D V E Q I V -K Q K I N I V G M Y C E D C D I E --I E D L K --(180)
+ + D LD P Y E +I E + L
AcrIC1 A F D D D G Y M T V R L D Q Q A Y P D ----Y R P E N D ----D -K H I M W R A L A L T A T G K E L E V F W L V E D
uvig_295656_CDS_0004 --E --------E -A -V -W E D (200)
+ + A E
AcrIC1 Y E D E E V N S W D F D I A D D W R E L
uvig_295656_CDS_0004 5 AcrIF18 0.45 View Alignment uvig_295656_CDS_0004 M W K -C K -K C --------G ----------G -E -V I A I V E S D D S F E F -S L D K Y G N P N E F L S Y (60)
M G +V +S+ +D G
AcrIF18 M T T I K A A Y -I S K D Q N W N D G T T T Y W F D V N G E -T -F G V V H G G E S W N A K V V D C D G A ------P
uvig_295656_CDS_0004 T T E D V E Q I V K Q K I N I V G -M -Y C E D C D I E I E D L K E -E A V W E D (101)
+ + +
AcrIF18 --------------S -D Q -Y ----T V D Q F N I T E D M --I -A E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;