3D Structure for uvig_295485_CDS_0028 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 95.82 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_295485_CDS_0028 1 AcrIE6 0.70 View Alignment uvig_295485_CDS_0028 M E S K K E -H V L E I L C Q Q ----I E L L A E E S K K T -N ---D V D V ----K I ----R -I -A -G E -I (60)
M + VLE ++ L + +
AcrIE6 M N N -D T E -V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K -Q -L -A S -R R
uvig_295485_CDS_0028 D R -M A D T -I L N I -----Y ------D --E (88)
++ +
AcrIE6 A -E L I E -I L E E -Q Y P G H A A D L S I K N L C P
uvig_295485_CDS_0028 2 AcrIIC4 0.59 View Alignment uvig_295485_CDS_0028 M E S -K --K E -----H -------V -------L E I L C Q Q ----I E L L A E E S K K T N -----D V (60)
M + + L + + + K N
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E N Y S K E L A -
uvig_295485_CDS_0028 -D V K I -R I A -G E I D -R M A D T I L N I ---Y -D -E (92)
++ E+ + ++ +
AcrIIC4 E K F N K E -A V N -E A V E -K L Q K A I D L A E K Q G I Q F
uvig_295485_CDS_0028 3 AcrIE1 0.57 View Alignment uvig_295485_CDS_0028 M E ---S K K E ----H -V -------L --------E -I ----L C Q ----Q ----I E L L A E E S K (60)
ME S + + + LA +
AcrIE1 M E K K L S D A Q V A L V -A A W R K Y P D L -R E S L E E A A -S -I L S L I V F Q A E T -L S D Q A N E L A N Y I R
uvig_295485_CDS_0028 K T N D V ---D V K -I R I -A G E I D R -M A -D -T -I L N I --------Y ----D ---E (112)
++ + + R Y D +
AcrIE1 R Q -G L E E A E G A C -R N I D I M R A -K W -V -E -V -C G E V N Q H G I R V Y G D A I D R D V D
uvig_295485_CDS_0028 4 AcrIF25 0.55 View Alignment uvig_295485_CDS_0028 M E S -K --K -E ----H ----V L E ---------------I --------------L C Q Q ----(60)
M++ + V +
AcrIF25 M D N D D K K P D A L I H L R V P A E V K G R W V K E S R L E G M K L T D W I T G R V E A K A L S I A E V L E E A A A M
uvig_295485_CDS_0028 -------------------------------------------------I E L L A E E S K K - (120)
LL
AcrIF25 A R S L E D S P I F Y R N K L C A D G I V T I Q Q Q A A R F S A A T D D A T R L D A A L W A R E G Y Q L L S S G L P D S
uvig_295485_CDS_0028 ---T ---------N D V D V K I R I A G E ----I -D -R -M A D T I L N I Y ---D -E (170)
+ +R+ G + +
AcrIF25 Y S G A V P N E G R T G W V T A S Q M A R L F G G E A L W -I -E -R C Q Q E L G G A G K E D -G R
uvig_295485_CDS_0028 5 AcrIIA28 0.53 View Alignment uvig_295485_CDS_0028 M E -S ----K -K ----E -H -V ----L E I L C Q Q I E -L -L A E E S K K T ---N ----D V D V ----(60)
M + L ++ K
AcrIIA28 M K T I F T K K -Q T E E L L -N -D I S I E K Q K E L F N S M H D -F R S Q H A K E A R I P G W S D K Y N K -L E K K
uvig_295485_CDS_0028 ----K I R I A -G E I D R M A D T --I L -N -I ----Y -D -E (96)
+ D I
AcrIIA28 M L S D F E E V T G I K Y D T L E S -E L I W D -N -L S N K F L Y N S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;