3D Structure for uvig_294551_CDS_0050 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 90.80 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_294551_CDS_0050 1 AcrIIA27 0.73 View Alignment uvig_294551_CDS_0050 M N T Y Y Y E S ---N -----S V --E H L Q G N F I E A E S A S K A K Y L I W M N G A N E Y Y G ---S F S D F L (60)
M T S +EA + A + + + D
AcrIIA27 M K T F N I I V S E S A N L K E H S S E L V D N I I Y K V E A K N R R E A F K K A R E E Y -S F S S K W K F N M R D L T
uvig_294551_CDS_0050 K D -------V --K V R K V N K E (80)
+ +V
AcrIIA27 A I D N T H R R A W G R R Y L R V E E A
uvig_294551_CDS_0050 2 AcrIE2 0.72 View Alignment uvig_294551_CDS_0050 M N T Y Y Y E S -N S V E H L -Q G N F I E -A E S ----A -S K A K Y -L -I W M N G A N E Y -Y G -S F S D F L K (60)
MNTY + + + ++ A A + Y +
AcrIE2 M N T Y L I D P R K N N D N S G E R F T V D A -V D I T A A A K -S A A Q Q -I L -G E E F E G L V Y -R E T G E S N -
uvig_294551_CDS_0050 -D ---------V ---K V R -K V -------N K E (91)
+
AcrIE2 G S G M F Q A Y H H L H G T N R T E T T -V G Y P F H V M E L
uvig_294551_CDS_0050 3 AcrIC9 0.62 View Alignment uvig_294551_CDS_0050 M -N ---T Y Y Y E S N S V E H L Q G N F I E A E ---S A S K A K Y L I W M N G A N E Y -Y G S F S D ----F -L (60)
M + + Y + F + + +
AcrIC9 M E T K M T S F Y K I T A Y -N S Q A L Y F --W G T D A D V D R Y V D W L N R D R -E I N V -Y A A E A I P E A E W -
uvig_294551_CDS_0050 -K -D ----V ---K -V -R K V -N -------K E (90)
AcrIC9 A -Q -Y E G R D D V L -S -G -E E C G W D D F M S A E A
uvig_294551_CDS_0050 4 AcrIF9 0.58 View Alignment uvig_294551_CDS_0050 M -N T Y Y Y E S N -S V -E H L Q G N F I E A E S A S K A K Y L I W M N G A N E Y Y G S F S D F L K D V K V R K V N -(60)
M Y ++ G+ IEA S+S AK ++ ++ VN
AcrIF9 M K A A Y I I K E V Q N I N S E R E G T Q I E A T S L S Q A K R I A S K -E Q ----C ---F H G T V M R I E T V N G
uvig_294551_CDS_0050 ------------K --E (76)
AcrIF9 L W L A Y K E D G K R W V D C Q
uvig_294551_CDS_0050 5 AcrIIC1 0.58 View Alignment uvig_294551_CDS_0050 M N -T Y -Y Y E S N S V -E H -L Q G N F --I E A E S A S -K -A K Y L I W M N G A N E Y Y G --S F ---S D F L (60)
M N + E+ + +Y G +
AcrIIC1 M A N K T Y K I G K N A G Y D -G C G L C L A A -I S E N -E A -I K V K Y L R -D I C P D Y D G D D K A E D W L R W G
uvig_294551_CDS_0050 K D -V K V ----R -K V N ----------------K E (93)
+V
AcrIIC1 T -D S R V K A A A -L E M E Q Y A Y T S V G M A S C W E F V E L
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;