3D Structure for uvig_293974_CDS_0028 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 89.80 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_293974_CDS_0028 1 AcrIIA27 0.70 View Alignment uvig_293974_CDS_0028 M T K F K V I R -Y ---W D ----T Y P D G V V A I --C D T E E E A E K I C S K Y R R S -R K -P --M -----(60)
M F +I D ++ + EA K K M
AcrIIA27 M K T F N I I V S E S A N L K E H S S E L V D N I I Y K V E A K N R R E A F K K A R E E Y S F S S K W K F N M R D L T A
uvig_293974_CDS_0028 ----Y D -----Y -L -I R K E G -E (82)
+
AcrIIA27 I D N T H -R R A W G R R -Y -L R V E E A
uvig_293974_CDS_0028 2 AcrIC9 0.66 View Alignment uvig_293974_CDS_0028 M -T ---K -F K V I R Y W D T Y P D G V V A I C D T E E E A E K I C S K Y R R S R K P M Y D Y L I R K E ------(60)
M T K+ ++ T+ ++++ R R Y++
AcrIC9 M E T K M T S F Y K I T A -Y N ---S Q A L Y F W G T D A D V D R Y V D W L N R D R -E I N V Y A A E A I P E A E W A
uvig_293974_CDS_0028 ---------------------G -E (84)
AcrIC9 Q Y E G R D D V L S G E E C G W D D F M S A E A
uvig_293974_CDS_0028 3 AcrIE2 0.61 View Alignment uvig_293974_CDS_0028 M T K F K V I -R Y W D -T Y -P -D G V V A I C D T E E E -A E K I C S K Y R R S R K P -M Y -D Y L I R K E ----(60)
M+ + V + + + S + R
AcrIE2 M N T Y L I -D P R K N N D N S G E R F T V D A V ---D -I T A A A K S A A Q Q I L G E E -F E G L V Y R E T G E S N
uvig_293974_CDS_0028 --------------------------G --E (90)
AcrIE2 G S G M F Q A Y H H L H G T N R T E T T V G Y P F H V M E L
uvig_293974_CDS_0028 4 AcrIF9 0.60 View Alignment uvig_293974_CDS_0028 M T -K F K V I R Y W D --T Y P -D G -V V A I C D T E E E A E K I C S K Y R R S R K P M Y D Y L I R K E ------(60)
M + + + + A +I SK I
AcrIF9 M K A A Y I I K E V Q N I N S E R E G -T Q I -E A T S L S Q A K R I A S K E Q C F --H G T V M R I E T V N G L W L A
uvig_293974_CDS_0028 ----G ------E (72)
G
AcrIF9 Y K E D G K R W V D C Q
uvig_293974_CDS_0028 5 AcrIIC5 0.59 View Alignment uvig_293974_CDS_0028 M T ---K F K V I R Y W D T Y P D G V V A I C D T E E E A E K I C S K ----------Y R R S R K P -M -----(60)
M+ KF+V + A+ T E AEK C R+S
AcrIIC5 M N N S I K F H V S Y -----D G T A R A L F N T K E Q A E K Y C L V E E I N D E M N G Y K R K S W E E K L R E E N C
uvig_293974_CDS_0028 ------------------Y ---D Y L I R K E ------------------------------- (120)
+ +
AcrIIC5 A S V Q D W V E K N Y T S S Y S D L F N I C E I E V S S -A G Q L V K I D N T E V D D F V E N C Y G F T L E D D L E E F
uvig_293974_CDS_0028 -------------G -E (136)
AcrIIC5 N K A K Q Y L Q K F Y A E C E N
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;