3D Structure for uvig_290815_CDS_0002 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 96.20 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_290815_CDS_0002 1 AcrIE6 0.73 View Alignment uvig_290815_CDS_0002 M K H L S H K Q L R N L T I S Q L D E I R L E V G H I I S A L R I -S Y K E T -----------D -S E A D Y K R M (60)
M +Q+ L + + L + K
AcrIE6 M -N N D T E V ----L E Q Q I K A F E L L A D E L K D R L -P T L -E I -L S P M Y T A V M V T -Y D -L I G K Q L
uvig_290815_CDS_0002 R S H E R Y L D A V K -A V L -Q H K R -N -T -G -Q --K (91)
S+ L + + +
AcrIE6 A S R R A E L I E I L E E Q -Y P G H -A A D L S I K N L C P
uvig_290815_CDS_0002 2 AcrIF23 0.61 View Alignment uvig_290815_CDS_0002 M K H L ---S H K --Q L R --------------N -----L ------------------------(60)
M +
AcrIF23 M T N F Q T W L D -S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y -N Y A A N T R R A S L S P R G I D A R A V A K T
uvig_290815_CDS_0002 ----------------------T ----I S Q -L -D -E -I R -L -E V G -H I I S -A L R -I S Y K E (120)
+ + + A+ E
AcrIF23 F G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q -D -Q -A -E M -A -C D P -S G L -L T A A -K F W -I E
uvig_290815_CDS_0002 T -D --S ---E A D Y K R M R S H E R Y L D A V K --------A V L Q H K -R -N T G -Q --K (172)
+ + +K A +
AcrIF23 N R N D S A Q E I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K V A K I A A E Y -N A L T A R W G F
uvig_290815_CDS_0002 3 AcrIE1 0.58 View Alignment uvig_290815_CDS_0002 M K H L ---S H K ---Q L R N L -------T I ----S Q L D -E -I R L ----E V G H I I S A L R I S Y K E (60)
M + + S L I + ++ L +
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L -E E A A S I L -S -L I V -F Q A E T L S D Q A N E L A N Y I R R
uvig_290815_CDS_0002 T D ---S E A D Y K R M R S H E R Y L D A V K A V L Q H -K ---R N T ---G --Q -K (106)
+ E + V ++
AcrIE1 Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D -R D -V D
uvig_290815_CDS_0002 4 AcrIIC4 0.57 View Alignment uvig_290815_CDS_0002 M K H L S H K Q L R N ------L ------T I S Q L D ----E I R L E V G H I I S A L R I S Y K E --T ----(60)
MK + + + + + S +R K
AcrIIC4 M K I T -S S N F A T I A T S E N F A K L S V L P K N H -R E P I K G L F K S A V E Q F S S A R D F F K N E N -Y S K E
uvig_290815_CDS_0002 -D -S E A D Y K R M R S H -E R Y L D A V -K -A V L -Q H K R N T G Q -K (99)
++ + +G
AcrIIC4 L -A E K F N K E ---A -V N E A V E K -L -Q K -A I D L A E K Q G I Q F
uvig_290815_CDS_0002 5 AcrIIA28 0.54 View Alignment uvig_290815_CDS_0002 M K -H L ---S H K Q -L R N L T I S Q L D E I R L E V G H I I S A L R I S Y K E T -----D ----S E A D Y K R (60)
MK + L ++I E+ S +
AcrIIA28 M K T I F T K K Q T E E L L N D I S I E K Q K E L F N S M H D F R S Q H A K E A R I P G W S D K -Y N K L E K K M L S D
uvig_290815_CDS_0002 M R S H E -R Y -L D A V K A V L Q H --K R N T --G -Q -K (92)
D + L +
AcrIIA28 F E E V T G I -K Y D T L E S E L I -W D N -L S N K F L Y N S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;