3D Structure for uvig_290113_CDS_0059 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 94.49 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_290113_CDS_0059 1 AcrIE1 0.73 View Alignment uvig_290113_CDS_0059 M -E ---I -K Y Y L L ---D -----------E -----------V K R L N R M N D L L E K E L I R -N K (60)
M L+ + L+ L + R
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E -A A S I L S L I V F Q A E T L S D Q A N E L A N Y I R R Q G L
uvig_290113_CDS_0059 G T N L A I Y E V I Q K N T S T I C E I V E -V ----------------L (101)
+ I E+ V
AcrIE1 E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D V D
uvig_290113_CDS_0059 2 AcrIC3 0.61 View Alignment uvig_290113_CDS_0059 M E ------------I K Y Y L ----L -----D ----------------E -------V -----(60)
M +
AcrIC3 M S I Q V T S T N G R T V N L E I E -L G S V -V A S S G Q V K F M A D K T D R G L E S R F L V P E A G N R R I E V A L
uvig_290113_CDS_0059 --K -R -L N -R -M -N D L L E K E L I R N K G T N L A I Y E V I Q K N T S T I C E I V E V --L (111)
L N +L EL+ + + I +
AcrIC3 T G -R -D L -E -A -A N -A L F S E L A A S V E A T N E ---M Y R E L D A E R A Q I N K A L E G
uvig_290113_CDS_0059 3 AcrIE6 0.60 View Alignment uvig_290113_CDS_0059 M E -I K Y Y L L D E V K R ---L -N R M N -D L L E K E L I R N K -------G T N L A I Y E V I Q K N T S T I -(60)
M L +K L L T +I + +
AcrIE6 M N N D T E V L E Q Q I K A F E L L A -D E L K -D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I
uvig_290113_CDS_0059 C E I -------V --E ----V --L (82)
+ +
AcrIE6 E I L E E Q Y P G H -A A D L S I K N L C P
uvig_290113_CDS_0059 4 AcrIF23 0.53 View Alignment uvig_290113_CDS_0059 M E I -K Y Y L ---L D -----------------------------------------------(60)
M L
AcrIF23 M T N F Q T W L D S A D -I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
uvig_290113_CDS_0059 ----------------E ---------------V -K R L N -R M N -D -L L -E K -E L I -R -N K - (120)
+ K I
AcrIF23 G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D P -S G L -L -T A -A -K F W -I E -N R -N
uvig_290113_CDS_0059 --------------------G -T -N L -A I -Y E V I Q K N T S T I C E I V E V --L (170)
+ + + K +
AcrIF23 D S A Q E I A G F V M Q Q K A L L A Q H R S -A K A A G -Q A D K V A K I A A E Y N A L T A R W G F
uvig_290113_CDS_0059 5 AcrIIA11 0.53 View Alignment uvig_290113_CDS_0059 M E --I K Y Y L L ------D -------------------------------------------(60)
M D
AcrIIA11 M A D M T L R Q F C E R Y R K G D F L A K D R E T Q I E A G W Y D W F C D D K A L A G R L A K I W G I L K G I T S D Y I
uvig_290113_CDS_0059 ------------------------------------------------------------ (120)
AcrIIA11 L D N Y R V W F K N N C P M V G P L Y D D V R F E P L D E E Q R D E L Y F G V A I D D K R R E K K Y V I F T A R N D Y E
uvig_290113_CDS_0059 -----E ----V -K R L N R M N D --------L L E K E L I R N K -G T N L A I Y E V I Q K N T S T I C E I V (180)
V +N D + N E+ Q+ + +
AcrIIA11 N E C G F N N V R E V R Q F I N G W E D E L K N E E F Y K A R E K K R Q E M E E A N N K F A E I M Q R A D E I L W N L -
uvig_290113_CDS_0059 E V L (183)
AcrIIA11 K E D
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;