3D Structure for uvig_289706_CDS_0003 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.51 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_289706_CDS_0003 1 AcrIE1 0.72 View Alignment uvig_289706_CDS_0003 M -T --F K T L Q ----R --------I --------Y -K -A -L -S -D -E -R -E -R -A -N E -S L C (60)
M +Q E
AcrIE1 M E K K L S -D A Q V A L V -A A W R K Y P D -L R E S L E E A -A -S -I -L -S -L -I -V -F -Q -A -E T L S -
uvig_289706_CDS_0003 -F A E -E Q I T R N E R K D M V V P P K W L D D R K R I S N D C D E L D ----R -A I E D F E -S Y ---D W H (118)
E ++ R E+ D
AcrIE1 D Q -A N E L A N Y I R R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N -Q H G I R V Y G D A I D R D V D
uvig_289706_CDS_0003 2 AcrIE6 0.72 View Alignment uvig_289706_CDS_0003 M T F K T L Q R I Y K A L S D E R -E R A N -E S L C F A E E Q I T R N E R K D -M -V ---V P P K W L D D R K R I S (60)
M + E + ++ +
AcrIE6 M -N N D T E V -L E Q Q I K A F E -L L A D E L K D R L P -T L E I L S P M -Y -T A V M V T Y D L I G K Q L A S R R
uvig_289706_CDS_0003 N D -C D E L D R A I E D F E S -Y ---D W -H (85)
+ + L+
AcrIE6 A E L I E I L E E Q Y P G H A A D L S I K N L C P
uvig_289706_CDS_0003 3 AcrIF23 0.62 View Alignment uvig_289706_CDS_0003 M -T F K -T L Q R ----------I Y K -A L S D --------------------------------(60)
M +F L + +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I -D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
uvig_289706_CDS_0003 --------------------E -R E ------------R -A -N E S -L C -F A E -E Q I T R N E R K (120)
E A I
AcrIF23 G G R A L T G T A R Q K E W A E K I R A E K V -Q Q M N Q D Q A E M A C -D -P -S G L -L T A A -K F W I E N R -N D
uvig_289706_CDS_0003 D M V V P P K W L D D R K R I S ----N D C -D -----E -L -D -R -A I E D F E S Y ---D W H (172)
++ K + + + ++ +
AcrIF23 S A Q E I A G F V M Q Q K A L L A Q H R S A -K -A A G Q A D K -V -A -K I A A E Y N A L T A R W G F
uvig_289706_CDS_0003 4 AcrIIC4 0.61 View Alignment uvig_289706_CDS_0003 M -T -F K T L Q -R ---------------I -Y K -A L S D E R E R A N E S L C F A E E Q I T R N E -R K D M (60)
M + + A E+ A +
AcrIIC4 M K I T S S N F -A T I A T S E N F A K L S V L P K N H R -E P I K G L F K S A V E Q F S S A R D F F K N E -N Y -S K
uvig_289706_CDS_0003 -V V P P K W L -D D R K R I S N D C D E L D R A I E D F E S Y D --W H (97)
++ ++ + L +AI+ E
AcrIIC4 E L A E K F N K E ----A V N E A V E K L Q K A I D L A E K Q G I Q -F
uvig_289706_CDS_0003 5 AcrIC3 0.60 View Alignment uvig_289706_CDS_0003 M T F K T ---L Q R ------I Y K ----A L -S -D ------E R E R A N E S L C -F A E ----------(60)
M+ R +R ES +
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A S -S -G Q V K F M A D K T D R G L E S R -F L V P E A G N R R I E V A
uvig_289706_CDS_0003 E -Q -I T R N E R K D M V V P P K W L D D R K R I S N D C D E L D R A I E D F E S Y D W H (106)
R ++ + + ELD
AcrIC3 -L -T -G R D L E A A N A L F S E L A A S V E A T N E M Y R E L D A E R A Q I N K A L E G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;