3D Structure for uvig_289706_CDS_0002 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 97.15 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_289706_CDS_0002 1 AcrIIA27 0.73 View Alignment uvig_289706_CDS_0002 M K K Y T C Y V Y E -R ----N -R K -F -W D R Y L V V A D C E L L A E V E L K R R L D E E T D T G --S -D S -Y (60)
MK + V E Y V A A ++ +
AcrIIA27 M K T F N I I V S E S A N L K E H S S E L V D N I I Y K V E A K N R R E A F K K A R E E Y S F S S K W K F N M R -D L T
uvig_289706_CDS_0002 D I ------------M S V V E C K (81)
I V E
AcrIIA27 A I D N T H R R A W G R R Y L R V E E -A
uvig_289706_CDS_0002 2 AcrIE2 0.68 View Alignment uvig_289706_CDS_0002 M K K Y T C Y V Y E R -N R K -F W D R Y L V V A D -C E L L A E V E L K R R L D E E T D T ----G S D ---S -Y D (60)
M Y N +R V A ++A + L EE + +
AcrIE2 M N T Y L I D P R K -N N D -N S G E R F T V D A V D I T A A A K S A A Q Q I L G E E F E G L V Y R E T G E S N G S G -
uvig_289706_CDS_0002 -I -M S V ---V ---------E ------C -K (89)
+
AcrIE2 M -F Q A -Y H H L H G T N R T E T T V G Y P F H V M E L
uvig_289706_CDS_0002 3 AcrIC9 0.65 View Alignment uvig_289706_CDS_0002 M -K ---K Y T -C Y V Y E R N R K F W D R Y L V V A D C E L L A E V E L K R R L D E E T D T G -S -D -S Y D I M S (60)
M ++ ++ L + Y +
AcrIC9 M E T K M T S F Y K -I T A -Y -N S Q A L Y F W ---G T D A D V D R Y -V D W L N R D R ---E -I -N V Y A A E A
uvig_289706_CDS_0002 V V --E -----------------------C -K (91)
+ E
AcrIC9 I P E A E W A Q Y E G R D D V L S G E E C G W D D F M S A E A
uvig_289706_CDS_0002 4 AcrIC8 0.57 View Alignment uvig_289706_CDS_0002 M K K Y T C Y V Y E R ----N ---R ---K F W -D R Y L V V A D C E L L A E V E L K R R L D E E T -----D T -(60)
M + R + + A + + + +
AcrIC8 M Y A -I -R K I Q F F Y G P T D K K S Y V G E E A G G R R E -L F K T R A E A Q A R I E D L E E G V Y Y L A H N E -S
uvig_289706_CDS_0002 G S -D S Y D I M S V V ---E ------C --K (86)
G Y I V
AcrIC8 G -R P D Y K I V W V R G E A -Q F E H A R W M R G
uvig_289706_CDS_0002 5 AcrIE8 0.57 View Alignment uvig_289706_CDS_0002 M K K Y T C Y V Y E R N R K F W D R Y L V V A D C E L L A E V E L K R R L D E E T D T G S D S Y D ---I -------(60)
M T R A ++E
AcrIE8 M T T I T I N T -Y --D -P E A R F N ---M S G E E A K E F -F A F V E E Q A K V S G F D V Y Y D S C T Y V D E E S
uvig_289706_CDS_0002 M S V -V --E --C K (72)
AcrIE8 E R F V E K C -F Q N Y
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;