3D Structure for uvig_288015_CDS_0029 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 90.40 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_288015_CDS_0029 1 AcrIIA27 0.74 View Alignment uvig_288015_CDS_0029 M N T Y Y Y E S ---N -----S V --E H L Q G N F I E A E S D A K A K Y L I W L K G A R E Y Y A ---T F G D F L (60)
M T S +EA + A + + D
AcrIIA27 M K T F N I I V S E S A N L K E H S S E L V D N I I Y K V E A K N R R E A F K K A R E E Y -S F S S K W K F N M R D L -
uvig_288015_CDS_0029 -K ---D -------I K V R K V N K E (82)
+ +V
AcrIIA27 T A I D N -T H R R A W G R R Y L R V E E A
uvig_288015_CDS_0029 2 AcrIE2 0.71 View Alignment uvig_288015_CDS_0029 M N T Y Y Y E S -N S V E H L -Q G N F I E -A E S -D A K A K Y L I W L K G A R E Y ----Y A -T F G D F L K D --(60)
MNTY + + + ++ A AK ++ E Y G+
AcrIE2 M N T Y L I D P R K N N D N S G E R F T V D A -V D I T A A A K S A A Q Q I L G E E F E G L V Y -R E T G E S N G S G M
uvig_288015_CDS_0029 ----------I K V R -K V -------N K E (87)
+
AcrIE2 F Q A Y H H L H G T N R T E T T -V G Y P F H V M E L
uvig_288015_CDS_0029 3 AcrIC9 0.63 View Alignment uvig_288015_CDS_0029 M -N ---T Y Y Y E S N S V E H L Q G N F I E -A E ---S D A K A K Y L I W L K G A R E Y Y A -T F ----G D -F (60)
M + + Y + F + +
AcrIC9 M E T K M T S F Y K I T A Y -N S Q A L Y F --W -G T D A D V D R Y V D W L N R D R -E I N V -Y A A E A I P E -A E
uvig_288015_CDS_0029 L K -D ------I -K -V -R K V -N -------K E (90)
+
AcrIC9 W A Q -Y E G R D D V L -S -G -E E C G W D D F M S A E A
uvig_288015_CDS_0029 4 AcrIIC5 0.58 View Alignment uvig_288015_CDS_0029 M N --T -Y Y Y E S N S V E H L Q G N F I E A E S D A K A K Y L I W L -K ----------------G -A -R -(60)
MN + + A +
AcrIIC5 M N N S I K F H V S Y -D --G T -A -R A L F N T K E Q A E K Y C L V E E I N D E M N G Y K R K S W E E K -L -R -E
uvig_288015_CDS_0029 E ------------Y Y -A -T F G D F L K --------D ---------------------I K ---(120)
Y + D
AcrIIC5 -E N C A S V Q D W V E K N Y T -S S Y S D L F N I C E I E V S S A G Q L V K I D N T E V D D F V E N C Y G F T L E D D
uvig_288015_CDS_0029 ------V ----R K V ---N K E (140)
+ K
AcrIIC5 L E E F N K A K Q Y L Q K F Y A E C E N
uvig_288015_CDS_0029 5 AcrIIC1 0.58 View Alignment uvig_288015_CDS_0029 M N -T Y -Y Y E S N S V -E H -L Q G N F -I E -A E S D A K -A K Y L I W L K G A R E Y Y A --T F G D -F L ---(60)
M N + + E + +Y +L
AcrIIC1 M A N K T Y K I G K N A G Y D -G C G L C L A A -I S E -N E A I K V K Y L R D I -C P D Y D G D D K A E -D W L R W G
uvig_288015_CDS_0029 K -D -I K V ----R -K V ---N --------------K E (95)
+V
AcrIIC1 -T -D S R V K A A A -L E M E Q Y -A Y T S V G M A S C W E F V E L
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;