3D Structure for uvig_287793_CDS_0071 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.04 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_287793_CDS_0071 1 AcrIIA7 0.71 View Alignment uvig_287793_CDS_0071 M K N E T F D F -S E A L R R M K E G K K V R R K I F A D G T Y A Y I -D -K -N Y ------------------(60)
M AL K G+ V RK + +
AcrIIA7 M T --F ---G -Q A L E S L K R G H L V A R K G W N G K G M F I F M R P E D S L P T N M I V N Q V K S L P E S F K R
uvig_287793_CDS_0071 -----L -----G -----S E A -L M Y N S V G R A A P V L W L L P E T I L A T D W E E -V (110)
+ M G ++ + LA+DW
AcrIIA7 W V A N N -H G D S E T D R I K F T A Y L C M K A A D G T I V N G W L A S Q T D M L A N D W V I V E
uvig_287793_CDS_0071 2 AcrVIA3 0.58 View Alignment uvig_287793_CDS_0071 M K N E T F D F S E A L -R R M K E G K K V R R K -I F A D G T --Y -A Y -I -D K N Y -L -G -S E A L M Y N S V G (60)
M F L + + K +L S
AcrVIA3 M F K -E --F ---L E -K C L R Y G N L Y I L E E T -G D R K K -V K -R -I S K R H G K V T E A S V L L F D S G T
uvig_287793_CDS_0071 R A A P -V L W -L L P E T I --L A ----T D W E E --V (91)
+ L + E
AcrVIA3 K R T T I N E I Y L N S Q G Y F I I R D Q K R L K L E -K F K
uvig_287793_CDS_0071 3 AcrIIA4 0.57 View Alignment uvig_287793_CDS_0071 M K N E T F D F ---S E A L R R M K -E ---G ---K K -V -R -R K I -F A D G T Y A Y I D K N Y L G S ---E A (60)
M + K R DG+ I + E
AcrIIA4 M N -I N D L I R E I K N K D Y T V K L S G T D S N S I T Q L -I -I R V -N N -D G N E Y V I S E S E N -E S I V E K
uvig_287793_CDS_0071 L M Y N S -V G R A A P -V ------L W L L P E T I L A T D W -E E -V (98)
E
AcrIIA4 F I S A -F K -N G W -N -Q E Y E D E -E E F Y N D M Q T I T L K S E L N
uvig_287793_CDS_0071 4 AcrIF18 0.56 View Alignment uvig_287793_CDS_0071 M K N E T F ---D F S E A L R R M K E G K K V R R K I F A D G T Y A Y I -D K N Y L G S -E A L M Y N S V G R A A P V (60)
M S +G G + A G
AcrIF18 M T -T -I K A A Y I S K -D Q N W N D G T T T Y W F D V -N G E T F G V V H G G E S -W N -A K V V D C D G A -P S -
uvig_287793_CDS_0071 -L W L L P E T I -L A T D W E E -V (79)
++ + D
AcrIF18 D Q -Y T V D Q F N I T E D M -I A E
uvig_287793_CDS_0071 5 AcrIIA12 0.54 View Alignment uvig_287793_CDS_0071 M K N E T F D ---F S E A L R R M K -E -G K K V R R -K I F -A -D -G T Y A Y -I -D K N Y L G S E A L M Y N S V (60)
M + T E+++ K + + Y + + Y
AcrIIA12 M -S K T M Y K N D V I E L I K N A K T -N N E E L L F T S V E R N T R E A A T Q Y F R C P E K H V S D A G V Y Y G E D
uvig_287793_CDS_0071 G R A A -P -V L W L L P E T I -L A T D W -E -E -V (88)
+ + + E
AcrIIA12 F E -F D -G -F E I F E D D L I Y T R S Y D K E E L N
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;