3D Structure for uvig_287057_CDS_0003 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.55 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_287057_CDS_0003 1 AcrIE6 0.73 View Alignment uvig_287057_CDS_0003 M I P R R ---I R S Q I A L Q K D K I A L L E E E L K T K ----Q N P -T -A R A S I E K Y I D N E R N T L N R L Y (60)
M + +QI + + L + L T + ++ + + + L
AcrIE6 M -N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T -A V M V T Y D L I G K Q L A S R R A E L I
uvig_287057_CDS_0003 V E A K I N G -I N --L -T D -S -E -R (82)
+ + +
AcrIE6 E I L E E Q Y P G H A A D L S I K -N L C P
uvig_287057_CDS_0003 2 AcrIIC4 0.60 View Alignment uvig_287057_CDS_0003 M I -P -R R I R -S --------Q -I -A -L -----------Q K D K I A L L E E -E L K T K ---Q N P T (60)
M + ++ +
AcrIIC4 M K I T S S N -F A T I A T S E N F A K L -S -V -L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E N --Y
uvig_287057_CDS_0003 A R A -S I E K Y I D -N E R -N -T L N -R L Y V -E A K -I N G I N L T D S -E R (103)
+ +EK + A
AcrIIC4 S K -E L A E K F N K E -A V N -E -A V E -K L Q K -A I D -L A E K Q G I -Q -F
uvig_287057_CDS_0003 3 AcrIE1 0.56 View Alignment uvig_287057_CDS_0003 M I -----P -R -R -I -R -------S -Q ----I A L -----------Q K D K I A ----L L E E E L (60)
M + Q + + L +
AcrIE1 M E K K L S D A Q -V -A -L -V A A W R K Y P D -L R E S L E -E A A S I L S L I V F Q A E T L S D Q A N E L A N Y I
uvig_287057_CDS_0003 K T K -Q N P T A R A S I E K Y I D N E R N T L N R L Y V E A K I N ----G I N L T D S -E R (108)
+ + + ID R + E+ + D
AcrIE1 R R -Q -G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D V D
uvig_287057_CDS_0003 4 AcrIF23 0.55 View Alignment uvig_287057_CDS_0003 M -I P R -R I R --S Q -I A ------L --Q K ---------------------------------(60)
M + + +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
uvig_287057_CDS_0003 -------D --------K ----I -A ------------------L L E E -E L K T K -Q N P T A R A (120)
+ + +
AcrIF23 G R A L T G T A R Q K E W A E K -I R A E K V -Q Q M N Q D Q A E M A C D P S G L L T A A K F W I E N -R --N D S A Q
uvig_287057_CDS_0003 S I -E -K Y I D -N -E -R N -T -L N R L Y V E -A K I -N -G ----I -----N -L T D S ---E --R (177)
+ +
AcrIF23 E -I -A G F V -M -Q -Q -K A -L -L A Q H R S A K A -A -G Q A D K V -A K I A A -E Y N A L T A R -W G F
uvig_287057_CDS_0003 5 AcrIIA28 0.50 View Alignment uvig_287057_CDS_0003 M I ---P ----R R I R -S Q ----I A L Q K D K I A L L E E -E L K T K ----Q N P T ----A R A S I E K Y (60)
M + +K +
AcrIIA28 M K T I F T K K Q T E E L L N D I S I E K Q K E L F N S M H D F R S Q H A K E -A R I P G W S D K Y N K L E K K M L S D
uvig_287057_CDS_0003 I D N E R N -T L N -R -L Y V -E A K I N G I N L T D S ---E R (94)
+ L I NL+
AcrIIA28 F E E V T G I K Y -D -T L E -S -E L I -W D N L S N K F L Y N S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;