3D Structure for uvig_285336_CDS_0087 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 91.07 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_285336_CDS_0087 1 AcrIE1 0.70 View Alignment uvig_285336_CDS_0087 M -T -A I Q R K ---I -------K ----V S ---D -L -E D -R L -R -A A -E A -A V E E S Q K A V I E C (60)
M + + + + + + ++
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A A S I -L -S L I -V -F -Q A -E T L S D Q A N E L A N Y I
uvig_285336_CDS_0087 T E A Y M S L Q K -N Y N A L F D K -W -I -R -L -T E -Q -Q N Q -A R K -E -Q -L E R M Q F G -N K S N -S K L (120)
+ D + + R +
AcrIE1 R R Q G L E E A E G A C R N I -D I M -R -A -K -W V -E -V C G -E V N -Q -H -G I -R V Y --G D A I -D R D V
uvig_285336_CDS_0087 C (121)
AcrIE1 D
uvig_285336_CDS_0087 2 AcrIE6 0.60 View Alignment uvig_285336_CDS_0087 M T A I Q R K I K V S D L E D R L R A A E A A V E ---E S Q K A V I E C T E A Y M S L Q K N Y N A L F D K W I R L T E (60)
M LE ++A E++++ + + + Y + +Y ++ +
AcrIE6 M -N ----N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A
uvig_285336_CDS_0087 Q Q N Q A R K E ----Q L E R M Q F G N K -S N S K L -C (90)
+ E + L
AcrIE6 E L I E I L E E Q Y P G H A A D L -----S -I K N L C P
uvig_285336_CDS_0087 3 AcrIC3 0.58 View Alignment uvig_285336_CDS_0087 M -T A I --Q R K --I ------K V S ----D L E D -------R L R ----A -A E -A -A V E E S Q K A V (60)
M + + + + E ++ +
AcrIC3 M S I -Q V T S T -N G R T V N L E I E L G S V V A S S G -Q V K F M A D K T D R G L E -S R -F -L V P E A G N R R I
uvig_285336_CDS_0087 I -E C T E A Y M S L Q K N Y N A L F D K W I R L T E Q Q N Q A R K E Q L E R M Q F G -N -K S N S K -L C (114)
+ A+ + L + E N
AcrIC3 E V A --L ----T G R D L E A A N A L F S E L A A S V E A T N -E M Y R E L D A E R -A Q I N K A L E G
uvig_285336_CDS_0087 4 AcrIIA11 0.52 View Alignment uvig_285336_CDS_0087 M T A I Q R K ----I ----------------------------------K ---------V S -D (60)
M + + K
AcrIIA11 M A D M T L R Q F C E R Y R K G D F L A K D R E T Q I E A G W Y D W F C D D K A L A G R L A K I W G I L K G I T S -D Y
uvig_285336_CDS_0087 L E D R L R --------A A E ---A ---------------------------------------(120)
+ D R +
AcrIIA11 I L D N Y R V W F K N N C P M V G P L Y D D V R F E P L D E E Q R D E L Y F G V A I D D K R R E K K Y V I F T A R N D Y
uvig_285336_CDS_0087 ----A V E E S Q K A V I E C T E -A Y M -S L Q K -N Y N -A L F D K W I R L T E Q -Q N Q A R K E -Q L E R -M Q (180)
+ + V L K + A +E MQ
AcrIIA11 E N E C G -F N N V R E V R Q F I N G -W E D E L -K N ---E E F Y K A R E K K R Q -E M E E A -N N K F A E -I M Q
uvig_285336_CDS_0087 F G N K S N -S K L -C (192)
+
AcrIIA11 R A D E I L W N L K E D
uvig_285336_CDS_0087 5 AcrIF23 0.51 View Alignment uvig_285336_CDS_0087 M T -A I Q -R K ---I -----------------------------------------K V -S --(60)
MT + I
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V -A -K T
uvig_285336_CDS_0087 -----------------D L E D R L R --------A A E A A V E E S Q K A V I E C T E A Y M S L Q K N Y N (120)
+ A+ E
AcrIF23 F G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D P S G L L T A A K F W I E N R N D S A Q E I A
uvig_285336_CDS_0087 A L F D K W I R L T E Q Q N Q A R K E ----Q L E R M Q F G -N -K -S N S K --L C (164)
L Q +A+ + + +
AcrIF23 G F V M Q Q K A L L A Q H R S A K A A G Q A D K V A K I A A E Y -N -A -L T A R W G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;