3D Structure for uvig_285269_CDS_0037 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 95.05 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_285269_CDS_0037 1 AcrIE6 0.73 View Alignment uvig_285269_CDS_0037 M D K K Q T D K A K T I M R K A Y E V Y N E I D A L V G Q L Q R E K V ---D Y E E -I E E L I T A R N T S C N V V D S (60)
M + + +D L L + Y + + +
AcrIE6 M N -N D ---T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E
uvig_285269_CDS_0037 L Q Y I I E T ----F D -E ---I --N M (83)
L I+E +
AcrIE6 L I E I L E E Q Y P G H A A D L S I K N L C P
uvig_285269_CDS_0037 2 AcrIE1 0.70 View Alignment uvig_285269_CDS_0037 M D ---K K ----Q T D -------K -------A K T ----I -M -R K -A Y E V Y N E I D A L V G Q L Q R (60)
M+ A + A + + L+ + R
AcrIE1 M E K K L S -D A Q V A L V A A W R K Y P D L R E S L E E A A S I L S L -I -V F -Q A E T L S D Q A N E L A N Y I R R
uvig_285269_CDS_0037 E K V D Y E E I E E L I T A R N T S C -N V -V D -S L Q ---Y I I E -T -F D E I ----N M (109)
EE+E + V ++
AcrIE1 -Q G L -E E A E G A C R N I D I M R A K -W V -E V C G E V N Q H G I R -V Y G D A I D R D V D
uvig_285269_CDS_0037 3 AcrIIC4 0.64 View Alignment uvig_285269_CDS_0037 M D K K --Q T D K ------A K T -----------I M R -K -A Y E V Y N E I D A L V G Q L Q R E K -V D Y E (60)
M + + + + E E
AcrIIC4 M K I T S S N F A T I A T S E N F A -K L S V L P K N H R E P I K G -L F K S A V E Q F S S A R D F F K N E -N Y S K E
uvig_285269_CDS_0037 E I -E E L I T A R N T S C N V V D S L Q Y I I E T F D E I ---N M (95)
+ + +V+ LQ +I+ +
AcrIIC4 L A E K ---F N K E A V N E A V E K L Q K A I D L A E K Q G I Q -F
uvig_285269_CDS_0037 4 AcrIC3 0.57 View Alignment uvig_285269_CDS_0037 M D K K ---Q T D -K ---A ----K T ---I M R K A Y E V Y N E I D A L V G -Q L Q -R -E -K --------(60)
M ++ + + D +
AcrIC3 M S I Q V T S T N G R T V N L -E I E L G S V V A S S G Q V K F M A D K T D R G L E S R F -L -V -P -E A G N R R I E
uvig_285269_CDS_0037 --V ---D Y ----E E I E E L I T A R N T S C N V V D S L Q Y I I E T F D E I -N M (105)
+ D EL+ + L + +
AcrIC3 V A L T G R D L E A A N A L F S E L A A S V E A T N E M Y R E L D A E R A Q I N K A L E G
uvig_285269_CDS_0037 5 AcrIIA28 0.56 View Alignment uvig_285269_CDS_0037 M -D ---K K Q T D K -A K T I -M R K A Y E V Y N E I D A L V G Q L Q R E K ---V ----D Y E E I E E L I T A R (60)
M KKQT+ + I K E+ N Q +E ++
AcrIIA28 M K T I F T K K Q T E E L L N D I S I E K Q K E L F N S M H D F R S Q H A K E A R I P G W S D K Y N K L E K K M L S D F
uvig_285269_CDS_0037 N -T S C N V V D S L Q Y I -I -E T F -D E -I --N M (89)
+ D+L I ++ N
AcrIIA28 E E V T G I K Y D T L E S E L I W D N L S -N K F L Y N S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;