3D Structure for uvig_284681_CDS_0010 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.21 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_284681_CDS_0010 1 AcrIE6 0.73 View Alignment uvig_284681_CDS_0010 M E I N E G L L R K Y I F H N Q V L R I H N E A V A E T Y L E D A -----Y N D D -E E L -K D D M E H T -L K K S Q (60)
M +L + + + + + Y+ D ++ + +
AcrIE6 M N N D T E V L E ---Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M -V T Y -D L I G K Q L A S R R A
uvig_284681_CDS_0010 K I R E I E E E L L ----K -E ----L -N K (85)
+ EI EE
AcrIE6 E L I E I L E E Q Y P G H A A D L S I K N -L C P
uvig_284681_CDS_0010 2 AcrIE1 0.64 View Alignment uvig_284681_CDS_0010 M -E I ---N ---E G L L R --------------K ----Y -I -F -H -N -Q -V -L -R -I -H -N E A (60)
M ++
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A A S I L S L -I -V -F -Q -A -E -T -L -S -D -Q -A N
uvig_284681_CDS_0010 -V -A E T Y L E D A Y N D D E E L K D D M E H T L K K S Q K I R E ----I E E E L L -K -E -L ----N K (116)
A + E + + K + +
AcrIE1 E -L A N Y I R R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G -D -A -I D R D V D
uvig_284681_CDS_0010 3 AcrIIC4 0.62 View Alignment uvig_284681_CDS_0010 M E I N E G ---L --L -----------R -K ----Y I F H N Q V L R I -H N E A -V A -E T Y L E D A Y N D (60)
M I+ I + + A +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P -K -N H R E P I K G L F K S A V E -Q F S S -A R D F F K -N E N Y S
uvig_284681_CDS_0010 D E E L K D D M E H T L K K S -Q K -I -R -E I E E E L L K E L N -K (96)
E + + + + + K
AcrIIC4 K E L A E K F N K E A V N E A V E -K -L -Q K A I D L A E K Q G I Q F
uvig_284681_CDS_0010 4 AcrIIA28 0.58 View Alignment uvig_284681_CDS_0010 M -E -I ----N -E G L -L R K Y I F -H N Q V L R I H N E A V A E T Y L E D A -----Y N ----D D E E L K D (60)
M E L ++ L + + +A +
AcrIIA28 M K T I F T K K Q -T E -E L L N D I S I E K Q K E L F N S M H D F R S Q H A K E A R I P G W S D K Y N K L E K K M L S
uvig_284681_CDS_0010 D M E H T -L K K S Q K I R --E I E E E L L K E L -N -K (90)
D E K + I + L
AcrIIA28 D F E E V T G I K Y D T L E S E L I W D N L S N K F L Y N S
uvig_284681_CDS_0010 5 AcrIF25 0.57 View Alignment uvig_284681_CDS_0010 M E -I N E G ----L -L R -K ---------------------------Y -I F ------------(60)
M+ + +
AcrIF25 M D N D D -K K P D A -L I -H L R V P A E V K G R W V K E S R L E G M K L T D W I T G -R V E A K A L S I A E V L E E
uvig_284681_CDS_0010 -------------------H N -Q -V --L R ---------I H N E -------A --------V - (120)
+ + + + +
AcrIF25 A A A M A R S L E D S P I F Y R N K L C A D -G I V T I -Q Q Q A A R F S A A T D D A T R L D A A L W A R E G Y Q L -L
uvig_284681_CDS_0010 A E -T -Y L E ----D A Y N -D D -----E E L K D D M E H T L K K -S -Q -K -I R -E -I E E -E -L L K E L (180)
L A M + I L
AcrIF25 -S S -G -L P D S Y S G A V -P N -E G R T G W V T A S Q M A R L F G G E -A -L -W I -E -R C Q -Q -E L G G A G
uvig_284681_CDS_0010 ---N K (185)
+
AcrIF25 K E D G R
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;