3D Structure for uvig_279813_CDS_0004 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 95.85 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_279813_CDS_0004 1 AcrVA5 0.72 View Alignment uvig_279813_CDS_0004 M I Q K Q T W K D E I R I L I T D E K N L G S V Q I S I P L Y V S D I F G K A D A L I Y A L W V D I L Y R R R G V A K H (60)
M G + SI ++ I + V +R G+
AcrVA5 M -K -I E L ---------S ---G G Y I C Y S I --E ------E D E V T I D M V E V T -T -K R Q G I G S Q
uvig_279813_CDS_0004 L L Q L A E Q Q A K L N G V K T I G L E F N -K -D -E S D R F V L D W Y L R I G Y K Q F D K -K S N -L L I K K L E D (120)
L+ + A+ IGL D S ++++Y L +
AcrVA5 L I D M V K D V A R E V -G L P I G L Y A Y P Q D D S I S Q E D L I E F Y F S N D F E Y D P D D V D G R L M -R -W -S
uvig_279813_CDS_0004 2 AcrIB1 0.70 View Alignment uvig_279813_CDS_0004 M I Q K Q -T -W -----------------------------------------K D -E -I R I L I (60)
M +K+ ++
AcrIB1 M E S K N L R K L L N E Y E E I D I N E M L K N F R S I K N S G T K N D I E I F L H E K A I K F E K S S I S S T Y V V F
uvig_279813_CDS_0004 T -D E K N L G S V Q I S I P -L Y ----V S -D -I F ------------------G -K A D A L I Y A L W V (120)
+ D LG +I L + L+ L
AcrIB1 S E D N E I L G Y F T I A N R S L V I P K E N F G -I L S K T Q Q K K L G N S A A I L K N G D L M T S S F L L G Q L G K
uvig_279813_CDS_0004 D I -L -Y R R R G V A ----K -H L L -Q -L A E Q -Q -A K L N G V K T I G L E F N K D E S D R F V L D W Y L R I (180)
+ L L VK I LE + + ++ +Y
AcrIB1 N Y S D D I E N L I T G R E L L -T F A -Y -D L F L -K -I K E L I N V K Y I W L E C Q N ---E P K L I S F Y Q N F
uvig_279813_CDS_0004 G Y K Q F D K --K ---S N L L I K K L E D (203)
G K + + I L
AcrIB1 G F K M L E S L T S E E G L K V M I M E L -K
uvig_279813_CDS_0004 3 AcrIF5 0.42 View Alignment uvig_279813_CDS_0004 M I Q K Q T W K D E I R I L I T D E K N L G S V Q I S I P L Y V S D I F G K A D A L I Y A L W V D I L Y R R R G V A K H (60)
M + + + + + + +
AcrIF5 M S -----R P T V V T V T E ---T P R -N ---P G -S Y E V N V E R D G K M V V G R A -R A G ----S D P G A
uvig_279813_CDS_0004 L L Q L A E Q Q A K L N G V K T I G L E F N K D E S D R F V L D W Y L R I G Y -K Q F D K -K -S N L L I K K L E D (118)
++ A Q A G + + L
AcrIF5 A A A K A M Q M A M E W G S P N Y V I L G ---S --------N -----K -V L A F I -P -E Q L R V -K -M
uvig_279813_CDS_0004 4 AcrVIA2_new 0.40 View Alignment uvig_279813_CDS_0004 M I ---Q K Q T W ---------K -D E I R I L I T D E K N --L G S -V Q I S I P L Y V S D I F G K A D A L I Y (60)
M QK + ++ + + + D +
AcrVIA2_new M K N I H Q K I Q L N K L Q V K T V Q N K G K D L L I N A P T G S G K T -E A S L L A V -S ---D -A --S -K S V S
uvig_279813_CDS_0004 A L W V D I L Y R R R G V A -K -H L -L -Q -----------------------------------L -(120)
L + + +
AcrVIA2_new Y L L P -T V V S T N V M -Y -L R -L -K -R D Y K L N L S V Q T S T K K E I S N F A E G V H I K L E C P D F A L I D
uvig_279813_CDS_0004 A -E -Q -Q -A K L N G V K T I G L E F N K --D E S -D R -F -V -L D W Y L R I G Y K Q -F D K ---------(180)
K + TI + E + Q
AcrVIA2_new -F -I -K -T G K K T L G D T I I C D E F D H Y P E M V K -S -A -L M E Y K H T F S E T Q I I F V S A T L N K E S L
uvig_279813_CDS_0004 ------------------------------------------------------------ (240)
AcrVIA2_new M G I D L E E I A L D T E K N L I K Y K V Y P N D D F R M D D I I N N G K A Y G K K I G I I F N S I S Q L E C F I K P G
uvig_279813_CDS_0004 --------------------------------------------------------K --- (300)
AcrVIA2_new E D F Y D D H F S K F K K G E N D Y I I H S Q V D D Y D K A L A E N A I V N N D F S V L I G T D S I S Y S I D V -N F D
uvig_279813_CDS_0004 ------------------------------------------------------------ (360)
AcrVIA2_new I L I M M A S S E M A T N I Q R L G R C N R L N K H V T D Y N L Y F F G S Y L S D L K A P F I N E N V A F N N L E R I T
uvig_279813_CDS_0004 ------------------------------------------------------------ (420)
AcrVIA2_new S S H L C I S R K N I N E I K K E L P V S E I M E Y I E V K K H V L D E E E S L R P I P F K V R R G I E K E V V K F N A
uvig_279813_CDS_0004 ------------------------------------------------------------ (480)
AcrVIA2_new K G L K Q T K V I K T Y Q T F N M M D L K Y A F C E E Y Y Y D K K N S R A L D V I Q Q F D F E N D W F D R G D F T V K L
uvig_279813_CDS_0004 ------------------------------------------------------S -N -L L (540)
+
AcrVIA2_new Y N L K T E Q Q A L K Q L L L K L E E Y I E P E A P D E T D E D F Y Y R N P D I L L K Y T D Y D K L F I K G W T -Y S I
uvig_279813_CDS_0004 I K K -L -----E D (552)
+
AcrVIA2_new L -S I D G K T I Y I A
uvig_279813_CDS_0004 5 AcrIIA28 0.40 View Alignment uvig_279813_CDS_0004 M I Q K Q T W K D E I R I L I T D E K N L G S V Q I -S I P L Y V S D I F G K A D A L I Y A L W V D I L Y R R R G V A K (60)
M K + + K
AcrIIA28 M -K T I F T K K Q T E E -L ---------L N D -------------------I -------S I E K Q K
uvig_279813_CDS_0004 H L L Q L A E Q Q A K L N G V K T I G L E F -N -K D ---E S D R F V L D W Y L R I G Y K Q F D K -----K S N L L (120)
L + +K + + D ++ L + D L
AcrIIA28 E L F N S M H D F R S Q -H A K E A R I P -G -W S D K Y N K L E K K M L S D F E E V T G I K Y D T L E S E L I W D N L
uvig_279813_CDS_0004 I -K -K L E -D (129)
L
AcrIIA28 S N -K F L Y N S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;