3D Structure for uvig_264092_CDS_0036 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 88.74 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_264092_CDS_0036 1 AcrIE6 0.71 View Alignment uvig_264092_CDS_0036 M T T K Q T A L V K Q L E T S A F N I L K Q L Q G L S R D I A I K Q Y D S ----E E A I E L H H A I M S V T E L C D T (60)
M+ T ++ Q ++ + L + S + + ++
AcrIE6 M N -N D T E V L E Q ---Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E
uvig_264092_CDS_0036 L Q Y M R E E F N -D ---D N K -P -T -I (83)
L EE D
AcrIE6 L I E I L E E Q Y P G H A A D L S I K N L C P
uvig_264092_CDS_0036 2 AcrIE1 0.69 View Alignment uvig_264092_CDS_0036 M T ---T K Q T A L V ----K Q --------------L E T ----S A -F N I L K Q L Q G L S R D I A I K Q (60)
M + ++++ + + + + ++ Q++ L I Q
AcrIE1 M E K K L S D A Q V A L V A A W R -K Y P D L R E S L E E A A S I L S L I V F Q -A E T L S D Q A N E L A N Y I R R -Q
uvig_264092_CDS_0036 Y D S E E ----A I -E L H H A I M S V T E L C D T L Q Y M R E E F N -D D N K P T -I (105)
EE + E+C ++ D
AcrIE1 -G L E E A E G A C -R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D V D
uvig_264092_CDS_0036 3 AcrIIC4 0.64 View Alignment uvig_264092_CDS_0036 M T -T -K Q T A L -V --------K Q --------L -E -T -S -A F N I L K Q L Q G L S R D I A I K Q Y D -(60)
M T + A + +++ Q + + +Y
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P -I -K -G -L F K S A V E Q F S S A R D F F K N E N Y S K
uvig_264092_CDS_0036 S E E A I E L H -H A I M S V T E L C D T L Q Y M R E E F N D D N K -P -T I (99)
+ A+ E+ + LQ + +
AcrIIC4 E L A E K F N K E -A V N ---E A V E K L Q K A I D L A E K -Q G I -Q -F
uvig_264092_CDS_0036 4 AcrIF25 0.56 View Alignment uvig_264092_CDS_0036 M T T -K ---Q T A --------L -V ----K Q ---------------L E -T -S -A F N I ---L K Q (60)
M + + A +I L
AcrIF25 M D N D D K K P D A L I H L R V P A E -V -K G R W V K E S R L E G M K L T D W I T G R V E -A -K A L S I A E V L E E
uvig_264092_CDS_0036 L Q G L S R D I A I K -Q -----Y -----------D ------S -E E A I E L H H A I M S V T E L C D T L Q (120)
+ R + + + A+ + E L+
AcrIF25 A A A M A R S L E D S P I F Y R N K -L C A D G I V T I Q Q Q A A R F S A -A T D D A T R L D A A L W A R E G Y Q L L S
uvig_264092_CDS_0036 Y M R E -E ----F ------------------N ---------------D D N K P -T I (173)
K
AcrIF25 S G L P D -S Y S G A V P N E G R T G W V T A S Q M A R L F G G E A L W I E R C Q Q E L G G A G K E D G R
uvig_264092_CDS_0036 5 AcrIC3 0.56 View Alignment uvig_264092_CDS_0036 M T T K Q T A ---L -V -------K Q L ---E T -------S A F N I ---L K Q -L Q G L S R D -I A I K Q (60)
M+ T ++ + I
AcrIC3 M S I Q V T S T N G R T -V N L E I E L G S V V A S S G Q V K F M A D K T D R G L E S R F L V -P E A G N R R I -E V A
uvig_264092_CDS_0036 Y D ----S -E E -A I -E L -H H A I M S V T E L C D T L Q Y M R E E -F N D D N K P -T I (108)
++ SV + NK
AcrIC3 L T G R D L -E A -A N -A L -F S E L A A S V E A T N E M Y R E L D A -E R A Q I N K A L E G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;