3D Structure for uvig_263523_CDS_0004 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.12 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_263523_CDS_0004 1 AcrIE1 0.71 View Alignment uvig_263523_CDS_0004 M Q K ---G -F -K -G -L -Q D -S I S -V S I D T L K F V E E N T T G N N G V F L N -T -V -I D -T L -Q A Q -(60)
M K L+ E + + + Q
AcrIE1 M E K K L S D A -Q -V -A -L -V A A W -R K -Y P D L R E S L E E A A S I L S L I V -F -Q -A -E T L -S D -Q A
uvig_263523_CDS_0004 K K V I E Y L S N C L -D ------T E -M ----G I K N R C F D F L C E K G ---L M -N E F -Y -S -K (116)
++ Y+ + + +G
AcrIE1 N E L A N Y I R R Q G L E E A E G A C R N I -D I M R A K W V E V C G E V N Q H G I R V Y -G D -A I D R D V D
uvig_263523_CDS_0004 2 AcrIE6 0.66 View Alignment uvig_263523_CDS_0004 M Q K G F K G L Q D -S -I -S -V -S I D T -L K F -V E E N -T T G N N G V F L N ---T V I D T -L Q A Q K K V I (60)
M+ ++ I ++ +
AcrIE6 M N -N --D -T E V -L -E -Q -Q -I K A F E -L L A D -E L K D R L -P T L -E I L S P M Y T A V M V T Y D L I G
uvig_263523_CDS_0004 E Y L -S N C L D T E M G I K N R C F D -F -L C E K G L M N E F Y S K (96)
L + I
AcrIE6 K Q L A -S R R A E L I E I L E E Q Y P G -H -A A D L S I K N L -C P
uvig_263523_CDS_0004 3 AcrIC3 0.65 View Alignment uvig_263523_CDS_0004 M Q -K G F K G L Q D ------S I S ---V S I D T L K F V E E N T T -G -----N N G V F L N -T V I -D -T -(60)
M+ + +S ++KF + T G N I
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A S S G Q V K F M A D K T D R G L E S R F L V P E A G N R R -I E V A L T
uvig_263523_CDS_0004 L -Q -A Q K -K V I -E Y L S -N C L -D -T E M G I K N R C F D F L C E -K G L M N E F Y S K (109)
++ L L + N L + N
AcrIC3 -G -R -D L E -A A N -A L F S -E L A -A -S V E A T N E M Y R E L D A E R A Q I N K A L E G
uvig_263523_CDS_0004 4 AcrIF23 0.55 View Alignment uvig_263523_CDS_0004 M Q K G F K G L Q D ---S I S -------V -----S I D T L K F V E E ----N T ------------T -G (60)
M+ F D D
AcrIF23 M T N -F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A -S L S P R G I D A R A V -A -
uvig_263523_CDS_0004 ---------N N G V -F L N T V -I D T L Q A Q -K K V I E Y L S N -C L -D -T E M ---G I K N R C F D F L C (120)
+ + + +
AcrIF23 K T F G G R A L T G T A -R Q K -E W A E K I R A E -K V Q Q M N Q D Q A E M -A -C D P S G L L T A A K F W I E N R N
uvig_263523_CDS_0004 E --------------K ----------G ------L ----M N E F Y S ---K (168)
+ G N
AcrIF23 D S A Q E I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K V A K I A A E Y N A L T A R W G F
uvig_263523_CDS_0004 5 AcrIIC4 0.54 View Alignment uvig_263523_CDS_0004 M Q K G F K G L Q D S I S V S I D T L K F V E E N T T -G N -N G V F L N T V I D T L Q A Q K -K V I -E Y L S N C L -(60)
M +I S ++ + N + + ++ Q + + N
AcrIIC4 M K I T S S N -F A T I A T S -E N F A K L S V L -P K -N H -R E P I K G L F K S A V E Q F S S -A R D F F K N E -N
uvig_263523_CDS_0004 --D --------T E M -G -I K N -R C F D F L C E K G L M -N E F Y -S K (101)
+ + +
AcrIIC4 Y S K E L A E K F N K E A V N -E -A V E -K L Q K A I D L ---A E K Q G I Q F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;