3D Structure for uvig_258260_CDS_0006 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 91.90 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_258260_CDS_0006 1 AcrIE6 0.71 View Alignment uvig_258260_CDS_0006 V D Y E T ---L K I L Q D E Q A R L K Q E S L Q A L K A H Q K Y P -R K -L K P R I K Y E E L T A Q L M E V W R I A L (60)
L L E L + Y+ + QL ++
AcrIE6 M -N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M -Y T A V M V T Y D L I G K Q L A S R R A E L I
uvig_258260_CDS_0006 L H -G V N L -D T -G E R I I K -N -N (81)
+ + IK
AcrIE6 E I L E E Q Y P G H A A D L S I K N L C P
uvig_258260_CDS_0006 2 AcrIF23 0.62 View Alignment uvig_258260_CDS_0006 V -D Y E -T L K I ----L Q --D -----------------------------------------(60)
L +Q
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
uvig_258260_CDS_0006 ---------------E -Q -A R L -K Q E -S L Q A L K A H Q K Y P -R K ---L --------K P R --- (120)
A Q Q P +
AcrIF23 G R A L T G T A R Q K E W A E K I -R A E -K V Q -Q M N Q D Q A E M A C D P S G L L T A A K F W I E N R N D S A Q E I
uvig_258260_CDS_0006 I K Y E E L T A Q L M E V W R I A L L H -G --V -N L D ----T -G E R I I K N --N (165)
+ + L R A + G +
AcrIF23 A G F V M Q Q K A L L A Q H R S A K A -A G Q A D K V -A K I A A -E Y N A L T A R W G F
uvig_258260_CDS_0006 3 AcrIIA28 0.58 View Alignment uvig_258260_CDS_0006 V -D ---Y E T L K I -----L Q D -E Q A R L K Q E S L Q A L K A H Q K Y P R K L -K P R I K Y E E L T A Q L -M (60)
+ Q L + H K R KY L
AcrIIA28 M K T I F T K K Q T E E L L N D I S I -E K Q K E L F N S M H D F R S Q H A K E A R I -P G W S D K Y N K L E K K M L S
uvig_258260_CDS_0006 E V W R I A L L H ----G ----V -N L D T G E R I I K N N (92)
+ + ++ + + N+
AcrIIA28 D F E E V T G I K Y D T L -E S E L -I W D N L S N K F L Y N S
uvig_258260_CDS_0006 4 AcrIIC4 0.56 View Alignment uvig_258260_CDS_0006 V D --Y E T L K ---I ---------L Q D ----E Q A R L K Q E S L Q A L K A H Q K Y -P R K L K P R I K Y E (60)
+ L L + + E
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E N Y S K E L A E
uvig_258260_CDS_0006 E L -T A Q L M E V W R I A L L H G V N L D T G E R I I K -N N (92)
+ E+ + E+
AcrIIC4 K F N K E A V N E A V E K L Q K A I D L ---A E K Q G I Q -F
uvig_258260_CDS_0006 5 AcrIE1 0.56 View Alignment uvig_258260_CDS_0006 V D ---Y ---E T L K ----I -------L -Q -D -----------E Q A R L K Q E S L Q A L K A H Q K -(60)
+ L L ++ +
AcrIE1 M E K K L S D A Q V A L V A A W R -K Y P D L R E S L -E -E A A S I L S L I V F Q A E T L S D Q A N E L A N Y I R R Q
uvig_258260_CDS_0006 Y -P R K L -K P R I K Y E E L T A Q L M E V W R I A L L H G V N L D T G E R I -I K N -N (106)
+ + A EV + HG+ + G+ + +
AcrIE1 -G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V -Y G D -A I D R D V D
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;