3D Structure for uvig_253479_CDS_0035 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 80.77 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_253479_CDS_0035 1 AcrIIA27 0.72 View Alignment uvig_253479_CDS_0035 M N V Y L I Q S -T D -C -L --M D -Q A I -Q N -A I V V A E N R N I A I K K F S E E L R N N P Y C H Q S Y R S T W (60)
M I + V A NR A KK EE + +
AcrIIA27 M K T F N I I V S E S A N L K E H S S E L V D N I -I Y K V E A K N R R E A F K K A R E E Y S ---F S S -K W K F N -
uvig_253479_CDS_0035 -F S C K K I N L N K P Q M L I Q Y G G D T W Q F D E V -E Y E Q E (94)
I ++ G
AcrIIA27 M R D L T A I D N T H ---R R A W G R R Y L R V ---E ---E A
uvig_253479_CDS_0035 2 AcrIE2 0.65 View Alignment uvig_253479_CDS_0035 M N V Y L I Q S T D C L M ---D Q A I Q N A I -V -V -A E -N R N I A I K K F S E E L R N N P Y C H Q S Y R S T W -(60)
MN YLI + + +A + L
AcrIE2 M N T Y L I D P R K N N D N S G E R F ---T -V -D -A V -D I T A A A K S A A Q Q I L G -E ----E -F E G L V Y
uvig_253479_CDS_0035 F S C K --K I N L N K P Q M -L -I -Q Y -G G D T W Q F -D -E -V -E Y -E Q E (103)
N + G + +
AcrIE2 R E --T G E S N G S G M F Q A -Y -H H -L H G T N R T E T T V G Y P F H -V M E L
uvig_253479_CDS_0035 3 AcrIC9 0.65 View Alignment uvig_253479_CDS_0035 M -N ----V Y L I Q S T D C L M D Q A I Q N A I -V V A E N R N I A I K K F S E E L R N N P Y C H Q S Y R -S T W F (60)
M + Y I+ Q + + + + L +
AcrIC9 M E T K M T S F Y K I T A -Y --N --S -Q A L -Y -F W G T D A D V D R Y V D -W L N R D R ---E ---I -N V Y
uvig_253479_CDS_0035 S C K K I N L N K P Q M L I Q Y G G -D T ------W Q F D E V E Y E Q E (98)
I +QY G D +D+
AcrIC9 A A E A I P ---E A E W A Q Y E G R D D V L S G E E C G W D D F M S A E A
uvig_253479_CDS_0035 4 AcrIIC1 0.57 View Alignment uvig_253479_CDS_0035 M N V --Y L I Q S T D C L M D Q A I Q N A I V V A E N R N I A I K K F S E E L R N N P Y C H Q S -Y R S -T --W -F (60)
M Y I + D ++++ EN I +K + +
AcrIIC1 M A N K T Y K I G K N A G -Y D G C G L C L A A I S E N E A I K V K Y L R D I C P D Y -D --G D D -K A E D W L R W G
uvig_253479_CDS_0035 S C K -K I N L -N K P Q M L I Q Y G G D T W Q F D E V E -Y -E Q E (95)
+ ++ QY +
AcrIIC1 T -D S R V --K A A A L E M E Q Y A Y T S V G M A S C W E -F V E L
uvig_253479_CDS_0035 5 AcrIF9 0.55 View Alignment uvig_253479_CDS_0035 M -N V Y L I Q S T D C L M D Q A I Q N A I V V A E N R N I A I K K F S E E L R N N P Y C H Q S Y R S T W F S C K K I N (60)
M +Y+I + + A + + A + S E + T +
AcrIF9 M K A A Y I I K E V Q N I N S -E R E G T Q I E A T S L S Q A K R I A S K E -Q ---C -F ---H G T V M R I E T V -
uvig_253479_CDS_0035 L N K P Q M L I Q Y G G D T W Q F D E V E Y E Q E (85)
N L+ + +
AcrIF9 -N -G L W L A Y K E D G -K R W V --D -C -Q
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;