3D Structure for uvig_253437_CDS_0002 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.15 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_253437_CDS_0002 1 AcrIIA27 0.74 View Alignment uvig_253437_CDS_0002 M K I Y D V M S ----------I -Y -K E E D H V V I A K S E S E A I K T V V D Y L N Q F R T F H L F E P D D F -(60)
MK + V AK+ EA K + + + F D
AcrIIA27 M K T F N I I V S E S A N L K E H S S E L V D N I I Y K V E A K N R R E A F K K A R E E Y S F S S K -W K F N M R D L T
uvig_253437_CDS_0002 C A S D I D A D K F -S E -P T I -I N (80)
+ + +
AcrIIA27 A I D N T H R R A W G R R Y L R V E E A
uvig_253437_CDS_0002 2 AcrIE2 0.73 View Alignment uvig_253437_CDS_0002 M K I Y D V M S ------I ---Y K E E D H -V -V -I -A K -S E S E A I K T V V D Y L N Q F R -T F H L -F E P (60)
M Y + + A + L E
AcrIE2 M N T Y L I D P R K N N D N S G E R F -----T -V -D -A V -D I T A A A K S A A Q Q I L G E E F E G L V -Y R E T
uvig_253437_CDS_0002 ---D D ---F C A S D -I D A ---D -K --F S E P T I -I N (94)
F A + +
AcrIE2 G E S N G S G M F Q A Y H H L H G T N R T E T T V G Y P F H V M E L
uvig_253437_CDS_0002 3 AcrIC9 0.67 View Alignment uvig_253437_CDS_0002 M -K ---I -Y D V M S I Y K E E D H V V I A K S E S E A I K T V V D Y L N Q F R T F H L F E P D D F C A S D I D A -(60)
M Y + ++ ++ + VD LN R A I
AcrIC9 M E T K M T S F Y K I T A Y N -S Q A L Y -F W G T D A D V D R Y -V D W L N R D R ---E I --N V Y A A E A I P E A
uvig_253437_CDS_0002 --D K --F ----S E P T I ---------I N (87)
AcrIC9 E W A Q Y E G R D D V L S G E E C G W D D F M S A E A
uvig_253437_CDS_0002 4 AcrIIC5 0.61 View Alignment uvig_253437_CDS_0002 M -K -I -Y D V M S I Y K E E D H V V -I A K S E S E A I K T V V D -------------Y L N Q F R T F -H L -(60)
M I V ++ + A K +
AcrIIC5 M N N S I K F H V S Y -D G -T A R A -L -F N T K E Q A E K Y C L V E E I N D E M N G Y K R K S W E E K L R E E N -C
uvig_253437_CDS_0002 F -----E -P --D D -F C A S D ---I D A D K ---------------------------------(120)
SD I
AcrIIC5 -A S V Q D W V -E K N Y T S S Y S D L F N I C E I E V S S A G Q L V K I D N T E V D D F V E N C Y G F T L E D D L E E
uvig_253437_CDS_0002 --F -----S E ---P T -I I N (139)
+ N
AcrIIC5 F N K A K Q Y L Q K F Y A --E C E N
uvig_253437_CDS_0002 5 AcrIIC1 0.61 View Alignment uvig_253437_CDS_0002 M K --I Y D V M S -I Y -K E E --D H V V I A K S E S E ---A I -K T -V V D Y L N Q -F R -T F H L -F -E P -(60)
M Y + + ++I +E + +
AcrIIC1 M A N K T Y K I G K N A G Y D G C G L C L A A I S E N E A I K V K Y L R -D I -C P D Y D G D D K A E D W -L -R W -G
uvig_253437_CDS_0002 D -D -F C A ---S D I D A D K F S E P T -I ------I -N (93)
+ +
AcrIIC1 -T -D S R V K A A A L E M E Q Y A Y T S V G M A S C W E F V E L
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;