3D Structure for uvig_252083_CDS_0002 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 91.97 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_252083_CDS_0002 1 AcrIE6 0.74 View Alignment uvig_252083_CDS_0002 M D K -Y E E A V R I V -N -N Y I R G L K E C Y E N A C D I -V -G D K S K T P A V R A K H A R N A E E F Y T L Y N E (60)
M E + I+ + + D + +
AcrIE6 M N N D T E V ----L E -Q -Q I K A F E L L A D E L K D R L -P T L E I L -S P M Y T A V M V T Y D L I G K Q L A S
uvig_252083_CDS_0002 V N C I L Q D I I -S L ---D E -S -K -E --E S (87)
L +I+
AcrIE6 R R A E L I E I L E E Q Y P G H A A D L S I K N L C P
uvig_252083_CDS_0002 2 AcrIE1 0.71 View Alignment uvig_252083_CDS_0002 M -D K ----Y -E -E A V R -------I -----------V -N -N -Y I R G L K E C Y E N A C D I V G D K (60)
M K A+ + + ++A +++
AcrIE1 M E K K L S D A -Q -V -A L V A A W R K Y P D L R E S L E E A A S I -L -S -L I V F Q A E T L S D Q A N E L A N Y I
uvig_252083_CDS_0002 -S K T P A V R A K H A R N A E E F Y T L Y N E V N C I L Q D I -I S L D E S -K -E -E S (106)
RN++ EV ++ I +
AcrIE1 R R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D V D
uvig_252083_CDS_0002 3 AcrIIC4 0.65 View Alignment uvig_252083_CDS_0002 M D -K Y E E A V R ------------I --------V N N Y I R G L K E C Y E N A C D I V G D K S K T P A V R (60)
M + + + + E +A D + + +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V -L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E N Y S K E L A
uvig_252083_CDS_0002 A K H A -R N A E E F Y T L Y N E V N C I L Q D I I S L D E S K E -E S (96)
K + NE+ LQ +I L E
AcrIIC4 E K F N K E -------A V N E A V E K L Q K A I D L A E K Q G I Q F
uvig_252083_CDS_0002 4 AcrIC3 0.56 View Alignment uvig_252083_CDS_0002 M -D K Y -E E A V R ------------I -V -N -N ---Y I R G L K E C Y E ---N ----A -C -D I V -G (60)
M R + + + E
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A S -S -G Q V K F M A D K T D R G L E S R F L V P E A -G -N R R -I -
uvig_252083_CDS_0002 D ----K -S -K T P A V -R A -K -H A R N A E E F Y T L Y N E V N C I L Q D I I S L D E S K E E S (112)
+ A A NE L E
AcrIC3 E V A L T -G -R D L E A -A N -A -L F S E L A A S V E A T -N E M Y R E L D A E R A Q I N K A L E G
uvig_252083_CDS_0002 5 AcrIF3 0.56 View Alignment uvig_252083_CDS_0002 M -D -K Y E E A V ----R ---------------I ------------V -N -N -Y -I R G L K E C Y E (60)
M + ++ GL
AcrIF3 M S S T I S D R I I S R S V I E A A R F I Q S W E D A D P D N L T E S Q V L A A S S F -A -A -R -L H E G L Q A T V L
uvig_252083_CDS_0002 N -A C D I V G D K ---------S K ----------T P -A V R A K H A R N A E E F Y T L Y N -----E V N (120)
+ + D +P A R A +
AcrIF3 Q R L V D E S N R D E Y R E F Q A W E E A L L N A D G R V T S N P F A D W G W W Y R I A N V M L A T A S Q N V G V A W G
uvig_252083_CDS_0002 C I -L -Q D I -I S L -----D E S -K E --E -S (148)
+ E
AcrIF3 S H V -H G R -L M A -I F Q D R F Q -Q H Y E D E E C
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;