3D Structure for uvig_251901_CDS_0038 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 89.91 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_251901_CDS_0038 1 AcrIE6 0.70 View Alignment uvig_251901_CDS_0038 M D -D K E E L K A R I E A A E E D L G F F S L Y W D D I R K S ---G F -A ---T E K E L E Q G I N D A L D D L I N (60)
M D E L I A E + + A T + + +LI
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I -L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I E
uvig_251901_CDS_0038 A -K D K -L N ---E N --G -T --P P (82)
+ + P
AcrIE6 I L E E -Q Y P G H A A -D L S I K N L C P
uvig_251901_CDS_0038 2 AcrIIC4 0.60 View Alignment uvig_251901_CDS_0038 M D -D K E E L K --A -----------------R I E A A E E D L -G F F S L -Y W D -D I R K S G F ---A (60)
M A I + + K+
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E Q -F S S -A R D -F F K N E N Y S K E
uvig_251901_CDS_0038 -T E -K -E L E Q G I N D A L D D L I N A K D K L N E N G T P P (93)
+N+A++ L A D + +G
AcrIIC4 L -A E -K F N K E A V N E A V E K L Q K A I D L A E K Q G I Q F
uvig_251901_CDS_0038 3 AcrIF23 0.55 View Alignment uvig_251901_CDS_0038 M D -D K E E L ---K --------A ---------------------------------------(60)
M L
AcrIF23 M T N F Q T W L D S A -D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
uvig_251901_CDS_0038 ----------------R -----I E -A ----A E -E D L G F F S L Y W D D I R K S G F A T E K E L E Q G (120)
+ + E + K + + Q
AcrIF23 G G R A L T G T A R Q K E W A E K I R A E K V -Q -Q M N Q D Q A E M -A C D P S G L L T A A K F W I E N R N D S A Q E
uvig_251901_CDS_0038 I N D A L D D L I N A K D K -----L ---------------N -E N -G T -P --P (167)
I + +
AcrIF23 I A G F V M Q Q K A L L A -Q H R S A K A A G Q A D K V A K I A A E Y -N A -L T -A R W G F
uvig_251901_CDS_0038 4 AcrIE1 0.55 View Alignment uvig_251901_CDS_0038 M -D ----D K E E L -K ----A -------R ----I -E -A -------A E E -D -L G -F F S L Y W D -(60)
M E
AcrIE1 M E K K L S D A Q V A -L -V A A W R K Y P D L R E S L E E A -A -S -I L S L I V F Q A E T -L -S D -Q A N E L A N
uvig_251901_CDS_0038 D I R K S G F A T E K E L E Q G I N D A L D D L I N A K D K L N E N -------G -T --P -P (109)
IR++G + I + + +N
AcrIE1 Y I R R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I -D R D V D
uvig_251901_CDS_0038 5 AcrIIA28 0.52 View Alignment uvig_251901_CDS_0038 M D ------D K E E L K -A -R ----I E A A E E D L G F F S -L Y W D D I R K S -G F -----A T E K E L E Q (60)
M EEL + F ++R EK +
AcrIIA28 M K T I F T K K Q T E E L L N -D I S I E K Q K E L F N S M H D F R S Q H A K E A R I P G W -S D K Y N K L E K K M L S
uvig_251901_CDS_0038 G I N D A L -D D L I N A --K D K -L N E N -G --T --P P (92)
++ ++
AcrIIA28 D F E E V T G I K Y D T L E S E L -I W D N L S N K F -L Y N S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;