3D Structure for uvig_250833_CDS_0131 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 86.53 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_250833_CDS_0131 1 AcrIIA8 0.72 View Alignment uvig_250833_CDS_0131 M L D I -N K -Q R M Q Y S L Q G Q R F T -V Y D R D D D G N -I I Y T S Y T D S D G N K I -Y Y L D D D G N K I -P Q (60)
M + G K
AcrIIA8 M S I F T D -M I P ---------A E L -L ---I ---N ---------E ----Y -K K G Q S G A K H D --
uvig_250833_CDS_0131 N I E E K T G F S E P V T F S A N I S N K -L S E -V L V K E -F G I -D -D -S S S Y C Q I V T N K G Y L P I K S G D (120)
N G + N + S+ + +T
AcrIIA8 N Y V S -V G R I M V A I ----Y K N N S -F -K N -T G -T --V K -Y -Q D S T -H S G I T M S K V F I D G K E Y
uvig_250833_CDS_0131 Y I W K K S N V G R D A D G L V D V N T A D Y I V K G V A D E G L T V D L F --L L Q K N V K (167)
I T Y V G + L +
AcrIIA8 R I D I -------------D -T Q H Y E V Q D F D T S G R Q T T L I L K R I D L -Y G
uvig_250833_CDS_0131 2 AcrVIA3 0.42 View Alignment uvig_250833_CDS_0131 M L D I N K Q R -M Q Y -S -L -Q G Q R F T V Y D R D D D G N I I Y T S Y T D S D G N K I Y Y L D D D G N K I P Q N I (60)
M
AcrVIA3 M F K E --F -L E K -C -L -R -------------------------------------------
uvig_250833_CDS_0131 E E K T G F S E P V T F S A N I S N K L S E V L V K E F G I D D S S S Y C Q I V T ---N -K G Y L P I K S G D Y I W K (120)
+ ++ E + + + +
AcrVIA3 -----Y G -------------N L Y I L E E -----T G D R K K V K R I S K R H G K ---V T E A S V L L F
uvig_250833_CDS_0131 K S N V -G R D A -D G L V D V N T A D Y I V K G V A D E G L T V D L F L L Q -K N V K (164)
S R + ++ + + L K
AcrVIA3 D S G T K -R T T I N E I Y L N S Q G Y F -I I R D ---Q K R L K L E ---K -F -K
uvig_250833_CDS_0131 3 AcrIF9 0.38 View Alignment uvig_250833_CDS_0131 M L D I N K Q R M Q Y S L Q G Q R F T V Y -D R D D D G N I I Y T S Y T D S D G N K I Y Y L D D D G N K I P Q N I E E K (60)
M +
AcrIF9 M -K ---A A Y I I ------K ---E -------V Q N -------I --------------------
uvig_250833_CDS_0131 T G F S E P V T F S A N I S N K L S E V L V K E F G I D D S S S Y C Q I V T N K G -Y L P I K S G D Y I W K K S N V G R (120)
+ E + A+ + + ++ K + I T G L K
AcrIF9 N S E R E G T Q I E A T S L S Q A K R I A S K -E Q C F H -G T V M R I E T V N G L W L A Y K -E -----------
uvig_250833_CDS_0131 D A D G L V D V N T A D Y I V K G V A D E -G L T V D -L F L L Q K N V K (157)
D ++
AcrIF9 -------------------D -G ---K -R -W V --D C -Q
uvig_250833_CDS_0131 4 AcrIIA12 0.38 View Alignment uvig_250833_CDS_0131 M L D I N K Q R M Q Y S L Q G Q R ---F -T V Y D R D D D G N I I Y T S Y T D S D G N K I Y Y L D D D G N K I P Q N I (60)
M +
AcrIIA12 M S K T M ----Y K N D V ---I E L I K --------------------------------------
uvig_250833_CDS_0131 E E K T -G -F S E P V T F S A N I S N K L S E V L V K E F G I D D S S S Y C Q I V T N K G Y L P I K S G D Y I W K K -(120)
+E + F+ + E++ F + + G G+
AcrIIA12 -N A K T -N -N E E L L F T S -V E R N T R E A A T Q Y F R -C P E --K -H V -S D A G V Y --Y -G E D ----F
uvig_250833_CDS_0131 S N V G R D A D G L V D V N T A D Y -I V K G V A D E G L T V D L F L L Q K N V K (161)
+ ++ L +
AcrIIA12 -----------E -F D G F E I -----F E D D L I Y T R S Y D K E E L N
uvig_250833_CDS_0131 5 AcrIIA22 0.38 View Alignment uvig_250833_CDS_0131 M L D I N K Q R M Q Y S L Q G Q R F T V Y D R D D D G N I I Y T S Y T D S D G N K I Y Y L D D D G N K I P Q N I E E K T (60)
M+ + +
AcrIIA22 M V V E --E T R D L A E ------T ---------------------A ------D C V ----V ----
uvig_250833_CDS_0131 G F S E P V T F S A N I S N K L S E V L V K E F -G I D D S S S Y C Q I V T N K G Y L P -I K S --G D Y I W K K S N V (120)
+ +DD K
AcrIIA22 --------------------I E A I L -V D D ----------G L R Y R Q ---L S --V G I -K ---
uvig_250833_CDS_0131 G R -D -A D G L V D V N T A D Y I V K G V A D E G -L T V D L F L L Q K -N V K (161)
G + ++ +
AcrIIA22 --D -E -N G D I I R I V ------------P -------I S T V -L I
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;