3D Structure for uvig_243737_CDS_0053 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 96.34 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment uvig_243737_CDS_0053 1 AcrIIA7 0.73 View Alignment uvig_243737_CDS_0053 M N F G K A I Q L L R E G K R V Q R Q G W N G K G Q Y I E L A T C ---I S Y K ---N -T --------N N E I I N (60)
M+FG A+ L+ G+ V R GWNG + +
AcrIIA7 M T F G Q A L E S L K R G H L V A R K G W N G -K G M F I F M R P E D S L P T N M I V -N -Q V K S L P E S F K R W V A
uvig_243737_CDS_0053 A E H D -A -I ---G -N K A I A F V G T S G -V Q L G W L A S Q A D M L A E D W K L V D (106)
H + + G + GWLASQ DMLA DW +V+
AcrIIA7 N N H G D S E T D R I K F T A Y L C M K A A D G T I V N G W L A S Q T D M L A N D W V I V E
uvig_243737_CDS_0053 2 AcrIIA4 0.54 View Alignment uvig_243737_CDS_0053 M N F G K A I Q L L R E -G K R V Q R Q G W -N -G K G Q Y I E L A T C I S Y K N T N N E I I N A E -H D A I G N K A I (60)
MN +I ++ V +G + Q I ++ + + ++
AcrIIA4 M N I N D L I R E I K N K D Y T V K L S G T D S N S I T Q L I I R V N --N ----D G N E Y V I S E -S -E N E S I V
uvig_243737_CDS_0053 A F V G --T -S G V Q L G W L A S Q A D M L A E D ----W K -L -V D (97)
+ + K +
AcrIIA4 E K F I S A -F K N G W N Q E Y E D E E E F Y N D M Q T I T L K S -E L N
uvig_243737_CDS_0053 3 AcrVIA3 0.50 View Alignment uvig_243737_CDS_0053 M N F G K A I Q L L R E -G K R -V Q R Q G W N G K G Q Y -I E L A T C I S Y K N T N N E I I N A E H ---D -A I -G (60)
M + G + + + A
AcrVIA3 M F K -E F L E K C L R Y G N -L Y I L E E T G D R K K -V K R I S K ---R ---H G K V T E A S V L L F -D S G T K
uvig_243737_CDS_0053 -N K A I -A F V G T S G V Q L G W L A S Q A D M L A E D -W K L V D (95)
+ + + + ++G + L
AcrVIA3 R T T I N E I Y L N S Q G Y F I I R D Q --K R -L -K -L E -K F K
uvig_243737_CDS_0053 4 AcrIF18 0.50 View Alignment uvig_243737_CDS_0053 M N F G K A I Q L L R E G K R -V -Q R Q G W -N G -K G Q Y I E L A T C -I S Y K N T N N E I I N A E H D -A I G N K (60)
M+ + + N + D
AcrIF18 M T T --I -K ---A A Y -I -S -K D Q N W N -D G -T ------T T ------------Y W F D V -N -G E
uvig_243737_CDS_0053 A I A -F V G T S G V Q L G W L A ---S -Q A D M L A E D ----W K L V -D (100)
G ++ + + ++ + +
AcrIF18 T F G V V H G G E S W N A K V V D C D G A P S D Q Y T V D Q F N I T E D M I A E
uvig_243737_CDS_0053 5 AcrIIA12 0.50 View Alignment uvig_243737_CDS_0053 M N ---F -G -K A I Q L L R E ----G K R V Q R -Q G -W N -G K G Q Y I E L A T C I S Y -K N T N N E I I N A E (60)
M+ +I L++ + + + C + E
AcrIIA12 M S K T M Y K -N D V I E L I K N A K T N N E E L L F T S -V E R N T R E A A T Q Y F R C P E K H V S D A G V -Y Y G E
uvig_243737_CDS_0053 H D A I G N K A I A F V G T S G V Q L G W L A S Q A D M L A E D W K L V D (97)
+ + +
AcrIIA12 D F --E F D G F E I F -E D D L I Y T R S --Y -----D -K E E L N
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;